Gene DvMF_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2005 
Symbol 
ID7173924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2485775 
End bp2486938 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID643540522 
ProductAltronate dehydratase 
Protein accessionYP_002436416 
Protein GI218887095 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones101 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTA ATACCTTCCT CGGCTACCGC CGCGAAAATG GCCGCGTGGG CGTGCGCAAC 
CACGTGGTCA TCCTGCCCCT GGACGACCTT TCCAACGCCG CTTCGGAAGC GGTGGCCAAC
AACGTGAAGG GCACCATGGC CCTGCCGCAC CCGTATGGCC GCCTGCAGTT CGGTGAAGAC
CTCGAACTGC ACTTCCGGAC CCTGATCGGC GTGGGCAGCA ACCCCAACGT GGCTGCCGTG
GTGGTCATCG GCATCGAACC CCAGTGGACC AACCGCATCG TGGAAGGCAT CGCCAAGACC
GGCAAGCCGG TTGCGGGCTT CTCCATCGAG CAGAACGGCG ACCACAACAC CATCTGCAAC
GCCTCGCGCA AGGCCAAGGA ATTCATGCAC TGGGCCACCG AGCTGCAGCG CGTGGAGTGC
CCGGTGAGCG ACCTGTGGGT GTCCACCAAG TGCGGCGAAT CCGACACCAC CTCGGGCATC
GCCTCCAACC CCACCGTGGG CAACGCCTTC GACAAGCTGT ACGAGCAGGG CTGCACGCTG
CTGTTCGGTG AAACCACCGA ACTGACCGGC GGCGAGCACC TGGTGCTTGA ACGCTGCGCC
AACGACGAAG TGCGCAAGCA GTTCCAGTTC TTCTTCGACC GCTATGCGAA GCTCGTGGAC
GACCACAAGA CCAGCGACCT TTCCGACTCC CAGCCCACCA AGGGCAACAT CGAAGGCGGC
CTGACCACCA TCGAGGAAAA GGCGCTCGGC AACATCCAGA AGATCGGCCG CAAGGCCCCG
GTCGTGGGCT GCCTGGACAA GGCCGAAGCC CCCACCGGCC CCGGCCTGTG GTTCATGGAT
TCCTCTTCTG CCGCCGCCGA AATGGTGACC CTGTGCGCCG CCGCCGGTTT CGTGGTGCAC
CTGTTCCCCA CCGGGCAGGG CAACGTCATC GGCAACCCCA TCCTTCCCGT GGTGAAGCTG
TGCGCCAACC CGCGCACCGT GCGCACCATG AGCGAACACA TCGACGTGGA CGTGTCTGGC
ATCCTGCGCA AGGAACTGAC CATGGACGGC GCCGGCGACA AGCTGGTGGA AATGGCCATC
CGCACCGCCA ACGGCCGTAA CACCGCCGCC GAAGTGCTGG GCCACCGCGA GTTCGTCCTT
ACCCGCCTGT ACGAAAGCGC CTAG
 
Protein sequence
MTANTFLGYR RENGRVGVRN HVVILPLDDL SNAASEAVAN NVKGTMALPH PYGRLQFGED 
LELHFRTLIG VGSNPNVAAV VVIGIEPQWT NRIVEGIAKT GKPVAGFSIE QNGDHNTICN
ASRKAKEFMH WATELQRVEC PVSDLWVSTK CGESDTTSGI ASNPTVGNAF DKLYEQGCTL
LFGETTELTG GEHLVLERCA NDEVRKQFQF FFDRYAKLVD DHKTSDLSDS QPTKGNIEGG
LTTIEEKALG NIQKIGRKAP VVGCLDKAEA PTGPGLWFMD SSSAAAEMVT LCAAAGFVVH
LFPTGQGNVI GNPILPVVKL CANPRTVRTM SEHIDVDVSG ILRKELTMDG AGDKLVEMAI
RTANGRNTAA EVLGHREFVL TRLYESA