Gene DvMF_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1982 
Symbol 
ID7173901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2451196 
End bp2454372 
Gene Length3177 bp 
Protein Length1058 aa 
Translation table11 
GC content69% 
IMG OID643540499 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002436393 
Protein GI218887072 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCG TGCATCATTC CGGGGCCGCA TCCGTTGCAG TCCGGCTTGT GGCCCTTGCC 
CTGGCGATCG TGCTGTGCGG GACCGTGTCG TACCGGACGG CTGCCGCATC GGGCACGGCG
GTGCCGCTTG ATCCCGCTCT CCATGCGCCG GAAACGGTGC GTGCCGCTAC CCCGTCCCCC
ACGTCCCCAC CGGCGTCCCC ATCCCCGCCA TCCATACTGT CCTCTCTGTC CGTGCTGTTT
TCCCGGCCCC TGGGGGCCAT GGCGTCCGCC ACGTCCGACG CCCTGTCGGG CACCGCCTCA
CAGGCCGTCC CCACCGGCGT CCAGCCCCCC GCCCCCTGGT GGATGCGCCT CATCGACGAT
GCCGCGCTCG TTCTTCCGGC TGCCGCCCTG CTGCTGTGGC TGACCCTGCG TCTGCGCCGC
ACCCGCCGCG CCCTTAACCG GGCGGAAAAC ACCCTGGGCA GCATCGTGCA GGTCACCTCG
CCGCTGGTGG AGCAGGAGTT CTTTCGGGTG CTGGTGCAGC AGCTGGCCCA TGCCCTTGGC
GCGCGCTACG CCCTTGTCGG GGAACTGGGT GATCCGGGCA AACAGGGCAA GCAGGGCAAA
CAGGGAGAGT CGGCCAGACT GGCCGGACAA ACGGAACAGG CCAGTCAGGC CCATCAGGCC
AGGCAGGTCA GTCAGGCCAG TCAGGATGGC GGAAAGGCCG ATGACGACTA CCTGCGCGTG
CTGGCCGCCT GGCTGGGCGA CGCGCCCGGC GAACCCTTCG ACTATGCGCT GCACGGCACC
CCCTGTGCGC GGGTCCTCAA TTCGCCGGAC CTGTGCGTCT ACCCCGACGG CGTGCAGGAA
AACTTTCCCG AGGCCGAACT GCACGCCTCG CTGGGCATCC GCTCCTACAT GGGCCTTGCC
CTGCGCGATG CGCGGGGCAC CCCCCTTGGC GTGCTGGCCG TGTTCCACGA CCTGCCCATG
GCCCCGCCCA CGGGCGAGAG CATGGCGCTG ATGCGCATCC TTGCCGGACG CGCCACGGCG
GAACTGGAAC GGCTGCGCGC CGGGCGGGCC CTGCGTGAAA GCGAGGCCCG CTACCGGGGT
CTGTTCGAAA ACAACCACGT GGTGGCCCTG CTCATCGATC CCACCACCAA GGCCATCCGC
GACGCCAGCC CCGCCGCAGC AGAATTCTAC GGCTGGCCGC GCGACGTGCT GCGCACCATG
CACATCTCGG ACATCAACAC CCTGCCACCG GGCACGTTGC ACGGCGAACT TTCATCGGCG
GCGCGGGGCG AAAGGCAACG CTTCCGCTTT CGCCACCGCC TGGCCAACGG CACCACCCGC
GACGTGGAAT CGAACACCGG CACTCTGGTG CTGCACGGCG AGCCGCTGCT GTATTCCATC
ATCACCGACG TCACCGAACA GCGCCGGGCG GAAGAAGCCC TGCGGCACAG CGAACTGCGG
CTGCGCATGC TGGTGGAAAG CGCGGGCGAT GCCATCTACC TGGCGGACGG CGCAGGGCAC
ATCCTTGATG CCAACCCCGA GGCGGAACAT CAGACCGGCC ATACCCGCGA ACAGCTGCTG
CGCATGACCC TGTTCGACAT CGACGAGCGG CTCGACCAGC GCGTCTTCGC CCGGCTGCGC
GCGGAACTGG AATCCGCCCG CAAGGCCACC TTCGAGACCA CGCACCGCAC GCGCAACGGC
ACGCCGCTGC CGGTGGAAGT GCGCATGGCC CAGGTGGAAG AAACGGGGGA GGCGGAGGGC
GACCCGCTGC TGCTGGCCAT CGTGCGCGAC AGCTCGGCCC GCAAGCGGGC CGAAAGCGAA
CTGCGCTGCG CCAAGGAAGT GGCCGAAGCG GCCAGCCGCA CCAAAGGCGA GTTCCTGGCC
AACATGAGCC ACGAAATCCG CACCCCGCTC AACGGCATCA TGGGCATGCT GCAACTGTTG
CAGACAGACC CGCCCAAGGC CATGCGCACG GTGTACGTGG GAGCGGCCAC CCAGTCGTGC
CGCCGCCTGG GGCTGCTGCT GGGCGACATC CTGGACCTTT CGCGCATAGA GGCGGGCAAG
CTGGAACTGC ACGACGAACC CTTCGAGGCG CGGGCCGTGC TGGACGAGGT GCGCGGTCTG
TTCGAAGGCC CCGCCGCCGA ACGGGGGCTG ACCCTGAGGG TAAGCGTGGA CGAACGCATT
CCCCGCCATC TGCGCGGCGA CGCCATGCGC CTGCGCCAGG TGCTGTTCAA CCTGGTGGGC
AACGCGGTGA AGTTCACCGA CCAGGGCGAG GTGGTGGTGG AGGCATGGCG GGTGCAGGCA
TCGCGCTCGC GCGGATGCAG GGTGGTGTTC ACCGTGCGCG ATACCGGCAT AGGCATTGCC
GAAGAACGGC TGAAGGACAT CTTCGAGCCG TTCGTGCAGG CAGAGACGGC CAGCACCCGT
CGCTATCAGG GCGCGGGGCT GGGGCTGCCC ATCGTGCGGC GCCTGGTGCG GCTGATGTGC
GGCACCGTCA CCGTGGAAAG CACGCCGGGC GCGGGCACTG CCTTCAGCGT CAGTCTGCCC
TTCCGCTTCG TGAACAAGGT GGAGGAAGCC GTGGTCGAAC CGCACACCGC CGACGCCCTT
TCCCTGCGTG GCAGGGCCAT TCTGCTGGCC GAGGACGACG CGGTGAACCG TCTGGCGGTG
ACGCGCCTGC TGGAAAACAT GGGGGCGCGG GTGACCACCG CCGACAACGG CGAACGCGCC
GTGCAGGCCC TGCTGACCGC CGACTACGAC TGCGCGCTCA TGGACATCCA GATGCCGGTC
ATGGACGGGA TGGAGGCCAC CCGCCGCCTG CGGGCCCTTG CGCACGACGG CGCGCGCGAC
AGTGCCCGCG AAGGGGCGCA CGAGGGCGCA CGGGCGGCAG TAGAGGATGC GCGGGCGCCG
GGCACCACGG GTGACGCACC GCCCGCAGAG GATGCCGAGC CCGACGCGGA AAACGATGCA
GGGTCCGACG CCCTGCAAGA CCGCCGCATC GACCCGCGCA TCCTTCGGGC GCGCTCGGCA
ACGCCCATCA TCGCCCTGAC CGCCCACGCC ATGCGCGGTG ACCGTGAACA GTTTCTGGCG
GCGGGCATGG ACGGCTACCT GACCAAACCC GTGGAAGCCG CCACGCTGGC CAGCGCCATC
GTGCGGGTCA TCCACGAACA GGGCCTGCGC GAACGTGAGC CGGAGGGCCT GCACTAG
 
Protein sequence
MPSVHHSGAA SVAVRLVALA LAIVLCGTVS YRTAAASGTA VPLDPALHAP ETVRAATPSP 
TSPPASPSPP SILSSLSVLF SRPLGAMASA TSDALSGTAS QAVPTGVQPP APWWMRLIDD
AALVLPAAAL LLWLTLRLRR TRRALNRAEN TLGSIVQVTS PLVEQEFFRV LVQQLAHALG
ARYALVGELG DPGKQGKQGK QGESARLAGQ TEQASQAHQA RQVSQASQDG GKADDDYLRV
LAAWLGDAPG EPFDYALHGT PCARVLNSPD LCVYPDGVQE NFPEAELHAS LGIRSYMGLA
LRDARGTPLG VLAVFHDLPM APPTGESMAL MRILAGRATA ELERLRAGRA LRESEARYRG
LFENNHVVAL LIDPTTKAIR DASPAAAEFY GWPRDVLRTM HISDINTLPP GTLHGELSSA
ARGERQRFRF RHRLANGTTR DVESNTGTLV LHGEPLLYSI ITDVTEQRRA EEALRHSELR
LRMLVESAGD AIYLADGAGH ILDANPEAEH QTGHTREQLL RMTLFDIDER LDQRVFARLR
AELESARKAT FETTHRTRNG TPLPVEVRMA QVEETGEAEG DPLLLAIVRD SSARKRAESE
LRCAKEVAEA ASRTKGEFLA NMSHEIRTPL NGIMGMLQLL QTDPPKAMRT VYVGAATQSC
RRLGLLLGDI LDLSRIEAGK LELHDEPFEA RAVLDEVRGL FEGPAAERGL TLRVSVDERI
PRHLRGDAMR LRQVLFNLVG NAVKFTDQGE VVVEAWRVQA SRSRGCRVVF TVRDTGIGIA
EERLKDIFEP FVQAETASTR RYQGAGLGLP IVRRLVRLMC GTVTVESTPG AGTAFSVSLP
FRFVNKVEEA VVEPHTADAL SLRGRAILLA EDDAVNRLAV TRLLENMGAR VTTADNGERA
VQALLTADYD CALMDIQMPV MDGMEATRRL RALAHDGARD SAREGAHEGA RAAVEDARAP
GTTGDAPPAE DAEPDAENDA GSDALQDRRI DPRILRARSA TPIIALTAHA MRGDREQFLA
AGMDGYLTKP VEAATLASAI VRVIHEQGLR EREPEGLH