Gene DvMF_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1977 
Symbol 
ID7173896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2444216 
End bp2444506 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content62% 
IMG OID643540494 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_002436388 
Protein GI218887067 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATGC TCATTACCTA CGACGTGAAC ACCGAAGACC GCGAAGGCAA AACCCGCCTG 
CGTCGGGTAG CCAAGCTCTG CCTGGACTAC GGCCAGCGCG TGCAGTTTTC GGTATTCGAG
TGCGAGGTAG ACCCCGGCCA ATGGGAAACC CTGCGCCACA AGCTTGTGTC CACCATCGCC
CCGGAAAAGG ACAGCCTGCG CTTCTACCGC CTTGGCCGCG ACGGCAAGCG CCGGGTTGAG
CACGTGGGGA TCAAGGAACC CGTGGACCTT GAAGGCCCCC TTGTGGTGTA G
 
Protein sequence
MLMLITYDVN TEDREGKTRL RRVAKLCLDY GQRVQFSVFE CEVDPGQWET LRHKLVSTIA 
PEKDSLRFYR LGRDGKRRVE HVGIKEPVDL EGPLVV