| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1957 |
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| Symbol | |
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| ID | 7173875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2418778 |
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| End bp | 2419854 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643540473 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002436368 |
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| Protein GI | 218887047 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 104 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACGA AGCTGCACGC GGCCCGCGCC GCGCTGGTGA TGGTGGGCCT TGCCCTGGCG
GTGCTGGCGG CGACGCTGTT CGCGGGCCCC GCCGTGGCGG CGGAGGAAAA GGTGCTGCAC
GTCTACAACT GGTCGGAATA CGTGCCCCAG TCGGTGCTCG ACCGGTTCAC CAAGGAGACG
GGCATCAAGG TGGTGTACAC CACCTACGAA TCCAACGAGG CCATGTACGC CAAGGTCAAG
CTGCTGAAGG GCGTGGGTTA CGACGTGGTC GTGCCGTCCA CCTACTTCAT CTCCATGATG
CGCGACGACG GGCTGCTGGC CAGGATCGAC AAGTCCAAGC TGAAGAACTT CAAGAACCTT
TCGCCCAAGG TGCTGAACCA GCCGTTCGAT CCGGGCAACG AATACTCCGT GCCTTACATG
TGGGGTTCGG CGGGGCTGAT GGTGAACAGG AAGGTGGTGG ACCCGGCCTC CATCACCAGC
TGGAACGACC TGAACCGCCC CGAATTCGCG GGCAAGGTCA TCCTGTCCGA CGACCAGCGC
GACTCCATGG GCGTGGCCCT GAAGGCGCTG GGCTACTCGG TGAACTCCAC CAATGAAGCG
GAAATCAAGG CCGCCTACGA ATGGCTGAAG AAGCTGCTGC CCGCCGTGCG CGTGTTCGAC
GTGACCGCCA GCAAGCAGGC CTTCATCAGC GAGGAAGTGG CCGCGGGCCT GATCTGGAAC
GGCGATGCCT ACATCGCCGC CAGCGAGAAC GAGAACCTGG TGTACGTCTA CCCCAGGGAA
GGCGTGCCCC TGTGGGTGGA CAGCCTGGCC ATTCCCGTGG GGGCCAAGCA CAAGGACAAC
GCCCACAAGT TCATCGACTT CCTGCTGCGG CCCGACGTGG CCAAGGAATG CGTGGAGGAA
TACAACTACT CCACCCCCAA CGTGGGCGCG CAGAAGATCC TTTCGCCCGA GTTGGCCAAG
AGCCGCATCA CGTCGCCGAG TGACGCGGAC CTGAAGAACG CCGAGTTCAC CAACAGCGTA
GGCAATGCGC TGGAGATCTA CGAAAAGTAT TGGGAGATGC TGAAGACGGG CAGCTAG
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| Protein sequence | MRTKLHAARA ALVMVGLALA VLAATLFAGP AVAAEEKVLH VYNWSEYVPQ SVLDRFTKET
GIKVVYTTYE SNEAMYAKVK LLKGVGYDVV VPSTYFISMM RDDGLLARID KSKLKNFKNL
SPKVLNQPFD PGNEYSVPYM WGSAGLMVNR KVVDPASITS WNDLNRPEFA GKVILSDDQR
DSMGVALKAL GYSVNSTNEA EIKAAYEWLK KLLPAVRVFD VTASKQAFIS EEVAAGLIWN
GDAYIAASEN ENLVYVYPRE GVPLWVDSLA IPVGAKHKDN AHKFIDFLLR PDVAKECVEE
YNYSTPNVGA QKILSPELAK SRITSPSDAD LKNAEFTNSV GNALEIYEKY WEMLKTGS
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