Gene DvMF_1947 details

Gene Information

• Locus tag: DvMF_1947
• ID: 7173865
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 2404558
• End bp: 2406525
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 643540463
• Product: GTP-binding proten HflX
• Protein accession: YP_002436358
• Protein GI: 218887037
• COG category: [R] General function prediction only
• COG ID: [COG2262] GTPases
• TIGRFAM ID: [TIGR03156] GTP-binding protein HflX

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 107
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCGCAG ATGATCGGGC GCACCATGTT TCATTCCGCC AGCGCAGGAG CACTCCCATC 
GCCAAGGTTC TCGGCAACAC CCAGGGGCTC AAGCCCAGCC ACGTCAAGGC CCTGACCCGC 
CTATACCAGC GCCGCTTCCC GTCCGTGGGG GGCTATTCGC ACGAGCAGGC CCGCGAACTG 
GCCGCCCTGT CCCGCAGCGT GGGGCGGCAG GTGGCCGTGC TCATCGACCG GCAGGGCCGC 
GTGGCCATGG TGCTGGTGGG CGACACCGGG GCCATCACCA TTCCGGAACT GCCCCGCGCC 
CGCACCGGCA CGGGCCGCCT GCGCGGCCTG CGCCTGCTGC ACACCCACCT GGGGCCGGAC 
CTGCTTTCGC AGGAAGACCT GATGGACCTG CTGTTCCTGC GGCTGGACGG CTTCGGCGTG 
CTGACCGTCA ACGAATGGGG CGAGCCGCTG ACCTTCCAGC ACGCCCACCT GCTGCCGCAG 
CAAGAGGACG GCAAGCCCTA CCGGGTGCAA CCGGCCCAGC CGTGGGACCG CGTGGACACC 
GACGTGGTGG CCCAGGTGGA GGCCCTGGAA GAGGAAATGG CCCGTGCCGC CAGCGACGCG 
CGCGCCGTGG CCCCCGCCCG TGCGCGCGGC ACTGCCGCCA CCGCCGCCGG GGCCGTGCCG 
CAGGGCCGCA GCCATGCCGA GCACATTGCC CACACCGCCG CCCTTGCCGC CGAAGCGGAA 
GGCCCCGCCG CCGTGCTGGT CAGCGTTTCC ACCGCCCCTC GGCCCTTGCA GGAACTGAAT 
CTGACCGAAC TGACCGAACT GGCCCGCACC GCCGGGGTGC GCTGCGCGGG CACCCTGATC 
CAGCGCGTGC CCTCGCTGAA CCCCAAGTTC ATCCTGGGCA AGGGCAAGCT GGCGGAACTG 
GAGGTGCTGG CCCTGCAGGG CAACGCCACC ATGATCATCT TCGACGGCGA ACTTTCCCCG 
GCCCAGCTGC GCAACCTGGC CGACCTGACC GAGCGCAAGG TGCTGGACCG CACCCAGCTG 
ATCCTGGACA TCTTTGCCCA ACACGCCACC ACCCGCGCGG GCAAGTTGCA GGTGGAGATG 
GCCCAGCTGA AGTACACCCA GCCCCGCCTG GTGGGGAAAA ACCGTGCCAT GGACCGCCTG 
ATGGGCGGCA TTGGCGGGCG CGGCCCCGGC GAAACCAAGC TGGAAACCGA CCGCCGCCGC 
ATCCGCGACC GCATCGGGCG CATCAAGGAC GAGCTGGAAT CGCTGCGCCG CCAGCGCGCC 
TATGCCCGCG CCCGGCGGGC CAAGCAGCGG GTGCCGCTGG CATCGCTGGT GGGCTACACC 
AACGCGGGCA AGTCCACCCT GCTCAACGCC CTGACCAACA GCGCGGTGCT GGCCGAAAAC 
AAGCTGTTCG CCACGCTGGA TCCCACCACC CGTCGCCTGC GCTTTCCGCA CGAGCGCGAA 
CTGATCCTGG CCGACACCGT GGGGTTCATC CGCAACCTGC CCAAGGAGCT GCTGGAAGCC 
TTCCGCGCCA CGCTGGAAGA ACTGGAGGCG GCGGACCTGC TGATCCACGT GGCCGACGCG 
GGCCACCCCG AACTGGACCG CCAGCTGGGC GCGGTGGACA CCATCCTCAC CGACATGGAA 
CTGCACGAGG TGCCGCGCCT GCTGGTGCTG AACAAGTGGG ACACCCTGGA CGAGGAAACG 
CGCGAGGCCC TGCGCGCCGT GCACCCCGAC GCCATCACCC TGTCCGCCGC CACGCGGCAG 
GGGCTGGACG AACTGGTGGC GTCCATTGCC GCGCGCATCG ACTGGGAACG CGACCTGCGC 
CCCTGCGGCA AGCGCGCGGG CAAGGGCGGC GGCGAAGGCG ACGGGAACGA GTGCCCGGCA 
GACGATGGGA ACGAGGGCAG TTATGGGGCC AACCCGGACG AAGCAGGCAC AGACGAAGCG 
GAAGCCGGAT ACGACTGGCC GGAAATGGAA TCGGACCGGC TGAACTGA 

 

Protein sequence

MTADDRAHHV SFRQRRSTPI AKVLGNTQGL KPSHVKALTR LYQRRFPSVG GYSHEQAREL 
AALSRSVGRQ VAVLIDRQGR VAMVLVGDTG AITIPELPRA RTGTGRLRGL RLLHTHLGPD 
LLSQEDLMDL LFLRLDGFGV LTVNEWGEPL TFQHAHLLPQ QEDGKPYRVQ PAQPWDRVDT 
DVVAQVEALE EEMARAASDA RAVAPARARG TAATAAGAVP QGRSHAEHIA HTAALAAEAE 
GPAAVLVSVS TAPRPLQELN LTELTELART AGVRCAGTLI QRVPSLNPKF ILGKGKLAEL 
EVLALQGNAT MIIFDGELSP AQLRNLADLT ERKVLDRTQL ILDIFAQHAT TRAGKLQVEM 
AQLKYTQPRL VGKNRAMDRL MGGIGGRGPG ETKLETDRRR IRDRIGRIKD ELESLRRQRA 
YARARRAKQR VPLASLVGYT NAGKSTLLNA LTNSAVLAEN KLFATLDPTT RRLRFPHERE 
LILADTVGFI RNLPKELLEA FRATLEELEA ADLLIHVADA GHPELDRQLG AVDTILTDME 
LHEVPRLLVL NKWDTLDEET REALRAVHPD AITLSAATRQ GLDELVASIA ARIDWERDLR 
PCGKRAGKGG GEGDGNECPA DDGNEGSYGA NPDEAGTDEA EAGYDWPEME SDRLN