| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1940 |
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| Symbol | |
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| ID | 7173858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2394830 |
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| End bp | 2396575 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643540456 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002436351 |
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| Protein GI | 218887030 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 103 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAATC CTATCTTCAC CACCAGGGAA CGCTTTGCGC TGTTCGGCCT TGCCATCGCC
CAGGCGTTCC TGCTGCTGCT CATCCTGCTG CCCGCCCCGC GCGATTCCGA CGTGCTGCGC
GTGGCCGCCC CTGCCCGCGA ACGGGTGCTG ACGCGCCTTT CGCCCTACGG CCCCGGCTTC
GAACAGGAAC TGCTGACCGC CTTCTGCGCC CGCTACGGCT ACGAACTGCG CTGGGTGAAG
GCCGACAACC GCGACGAGGC CCTGCGACTG GTGGCCGACG GCTACGCCGA CGTGGCCGTG
GGCTTCGGCA CCGCGCCCGA CGCCCACGGG GCAGGCGGCG CAGGCGGCAA CGAAAGGGAC
GGCCACGATG ACGGCTCCGG CACCAACGCG TCCGGCGCAT CCGGTGCGTC CGGCGCATCT
GGCGCATCCG GTGCATCCGG CATTGCCGCT GCCGCAAACG ACGCCACGGG CGCAACGGAC
GCCGCGCCCG GCATTTCGCT GGCCGCGCTG CTGACCCGGC TGGCCACCGG CACCGACCCC
ATCCCCCTCA CCGACCTGGT GGCGGGACCG GCCTACGACC ATGCCCGCCC GGTACTGGTG
CGCTGGTCGG AACCAGATCT GCCCGCGCCC GTGCACGCCG CGCTGCGCGA TACCGGCACC
ACCGAAGCCG CACGGCACGG CCAGACCTCC GACGGACTGC GCTCTGCCCT GCTGCTGAAC
ACCTGGGAAA CCTCCGCGGG CCCGGCTGTA CCCCCCGTTC AGGGGCTGCT GCCGCCTTCC
AGCGGCCCGG CCCTTCCGTC CGGCGAATCC ACCGTGGACA CCGCATCCGA CGACGCCCCC
CGCCACGCCA TGGTGGCCGG CGACTCGTGG CGGCTGTGGC AGCCCTTCAT GGCCGAACCC
ACGGCGGGCC GGGTCACGGG CAAGCCCTTG TCCTACCATT GGTACTGGCG CGGCGACGAC
ACCACCCTGG CCCCCAGGCT GGACGAATTC TGGCGCGAGC GCACCGCCCC GGCAGACACC
CTGCTGGACG ACCTGACCGA GCGCTACTTC GGCTTTCTGC CGGAATCGCT GGGCGTGGCC
GAAGACGGCG ACTATACCGG GGCATCCGGC TATGCGGACA TCTTCGACCT GATGGACCTG
ATGACCGTGG TGACCGAAAA GCTGCCCGCC CACGCCCCCG CCATCAGCCG CGCCGCGGCC
CAGAGCAACA TCGACCCGCT GCTGCTGTCC GCCGTGATCT TCCAGGAATC GCGCTTCGAT
GCCTCTGCCC GCAGCAAGAC CGGGGTGCGC GGCATCATGC AGCTTACCCA GAACACGGCC
CTGCTGCTGA AGGTCAACCG CATGAACCCC AGCCAGTCCA TCCGGGGCGG GGCGCGCTAC
CTGCGCATGC TGTGGGACAG CCTGGACGAT CTGGACCTGC AACCGTGGGA CCGCTGGTTC
TTCACCCTGG CGGCCTTCAA CCAGGGGCCT GGCCACCTGC GCGACGCCAT CCGGCTGAAC
CAGGACCTTG GCGGCTCCGG CCGCACCTGG CGCGAACTGA AGGACACCTT TCCCAAACTG
GCGCGGCCCC GCTACCACGC CCGCACCCGG TACGGGTACT GTCGTGGCTA CGAGGCCGTG
GCATTCGTGG AAAGCGTGCG CTACTACTAT TACATACTCA ACGGGCTAGT CGCCCTCTCG
CGGCCGGAAG CTGAGCACCT TGCGCCGCTT CTGGACGCCG TCCCCGTCCG CTGGCCCACC
GTTTAG
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| Protein sequence | MHNPIFTTRE RFALFGLAIA QAFLLLLILL PAPRDSDVLR VAAPARERVL TRLSPYGPGF
EQELLTAFCA RYGYELRWVK ADNRDEALRL VADGYADVAV GFGTAPDAHG AGGAGGNERD
GHDDGSGTNA SGASGASGAS GASGASGIAA AANDATGATD AAPGISLAAL LTRLATGTDP
IPLTDLVAGP AYDHARPVLV RWSEPDLPAP VHAALRDTGT TEAARHGQTS DGLRSALLLN
TWETSAGPAV PPVQGLLPPS SGPALPSGES TVDTASDDAP RHAMVAGDSW RLWQPFMAEP
TAGRVTGKPL SYHWYWRGDD TTLAPRLDEF WRERTAPADT LLDDLTERYF GFLPESLGVA
EDGDYTGASG YADIFDLMDL MTVVTEKLPA HAPAISRAAA QSNIDPLLLS AVIFQESRFD
ASARSKTGVR GIMQLTQNTA LLLKVNRMNP SQSIRGGARY LRMLWDSLDD LDLQPWDRWF
FTLAAFNQGP GHLRDAIRLN QDLGGSGRTW RELKDTFPKL ARPRYHARTR YGYCRGYEAV
AFVESVRYYY YILNGLVALS RPEAEHLAPL LDAVPVRWPT V
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