Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1933 |
Symbol | |
ID | 7173851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2384612 |
End bp | 2386036 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643540449 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002436344 |
Protein GI | 218887023 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 98 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACAA CGCATGATGC CATAGTCAAC GACGCAGTCA CCTTTCTGAT ATTCGACCAT TTACCCATGG GCATTCTGTA TTGCGACGCC AGCTACGTGA TCCGTTTTGC CAACAAGGCC TATGCGGAAC TGCTGGGCAA GCGCCCCCAC GACATCATCG GCAGGAACAT TACCGAGGTC ATTCCCTCGT CGCGCGCGCC AGAGGTAATG ACCACCGGCC AGGCGGAAAT GGGTGACCTG TGCAGCATCC CCGGCCCCCG GGCCGATCAG AAGCTGGTGG TGAACCGCAT TCCCGTGCGC GATGCCGCGG GTGCGCTTGT CGGCATGATC TCGCAGGCCA TCTTCAATGA CCCCAGCGAA CTGAAACGCC TTTCCAACAA GATAGAGCAA CTGGGGCACA AGCTCAGCCA GTACAAGCGG CGCATGGCGG CCACCCTGCA TGCCCAGTAT TCGCTCGCCA GCCTGAAGGG CGAAAGCGCC TCCATGCACC AGATCAAGGA CCGTCTGCGC AGCTACGCCC GCATGGATGC GCCGGTCCTT GTCCTGGGCG CCACCGGCAC GGGCAAGGAA CTGGCAGCCC ATGCGCTGCA CGCCGAAAGC ACGCGCGCCG CCGGGCCGCT GGTCAGCATC AACTGCGCGG CCATTCCCAA GGATCTCTTC GAATCCGAAC TGTTCGGGTA CGTGCGCGGG GCATTTTCCG GCGCCCATCA CAGCGGGAAA ATGGGCCAGA TAGAGTTGGC AGACGGCGGC ACCCTGTTTC TGGACGAAAT AGGCGACATG CCCCTTCAGG CGCAGGCAAA GCTGTTGCGC GTACTGGAAA GCCGCACCAT CTGCCGCGTG GGCGCGGTAA CGGCGGAACC CGTGGACTTT CGGCTCATTG CGGCCACCAA CCGCAACATC AAGGACATGG TCCAGGCTGG CACGTTCCGC GAAGACCTGT ATTATCGCAT CAATACATTC ATCATAGAGA TTCCTTCGCT ACGCGACAGG AAGGAGGACA TCCTGCCTCT GGCGCATCAC TTTCTGGCTC GCATGGGGCA CGAGGGCGTA ACCTTTACCC CCGCCGCAGT ATCTGCGCTG CAATCGTTCG AGTGGCCGGG CAACATCCGG CAACTGCACA ACGCCATCCT GCATGCCGCC ACCATGCGCG AAGGCAGCGC CATAGACGTC TGCGCCCTGC CCCCGGAAAT ACGCCCGGTC CATACCAGCC CTGTCGCGCC TTGCCCGCTA CCGCAGGACA GGAGCGACCT TGCGGGCATT CTGGCCCACA ACGAGGCCGC TCTCATTGAA AATGCCCTGC GCGAGCAGGG CGGCAATGTC ACCAGGGCCG CATCCGCGCT GGGGGTTTCG CGCGCCACGC TGTACGAGAA GATGAAGAAG CACGGCGTCC ATGCCGTGCG TTCTCGCGAC AGGCAGGGGA ACTGA
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Protein sequence | MPTTHDAIVN DAVTFLIFDH LPMGILYCDA SYVIRFANKA YAELLGKRPH DIIGRNITEV IPSSRAPEVM TTGQAEMGDL CSIPGPRADQ KLVVNRIPVR DAAGALVGMI SQAIFNDPSE LKRLSNKIEQ LGHKLSQYKR RMAATLHAQY SLASLKGESA SMHQIKDRLR SYARMDAPVL VLGATGTGKE LAAHALHAES TRAAGPLVSI NCAAIPKDLF ESELFGYVRG AFSGAHHSGK MGQIELADGG TLFLDEIGDM PLQAQAKLLR VLESRTICRV GAVTAEPVDF RLIAATNRNI KDMVQAGTFR EDLYYRINTF IIEIPSLRDR KEDILPLAHH FLARMGHEGV TFTPAAVSAL QSFEWPGNIR QLHNAILHAA TMREGSAIDV CALPPEIRPV HTSPVAPCPL PQDRSDLAGI LAHNEAALIE NALREQGGNV TRAASALGVS RATLYEKMKK HGVHAVRSRD RQGN
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