Gene DvMF_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1888 
Symbol 
ID7173806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp2324731 
End bp2325333 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content68% 
IMG OID643540404 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_002436299 
Protein GI218886978 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAG CACAAGCCGG GGGCACCCGC TGCCCGTGGG CGCGCACGCC GGAGGAAATC 
GCCTATCACG ACACCGAGTG GGGCGTGCCC GTGCGCGACG ACCGCATCCA CTTCGAATTC 
CTGGTGCTGG AAGCGGCGCA GGCCGGGCTT TCGTGGCTGA CCATCCTGCG CAAGCGCGAA 
GGCTACCGCC GCCTGTTCGC CGATTTCGAC CCCGCCGCGG TGGCCCGGTA CACCCAGGCC 
GACGTGGAGC GGCTGCTGGG CGATGCGGCC ATCGTGCGCA ACCGCCTGAA GGTGGAGGCC 
GCCGTGCACA ACGCCCGGCT GTTCCTGGAC GTGCAGGCCC GCCACGGCAG CTTCGATGCG 
TTCATCTGGA ACTTCGTGGA TGGCCGCCCG GTGTGCAACC AGTGGCGCGA ACTGTCACAG 
GTACCCGCCA CCACGCCGCT GTCGGACACG GTGTCGAAGG AGCTGAAGCG GCTGGGCTTC 
AAGTTCGTGG GGTCCACGGT CATCTACGCC CACTTGCAGG CCACGGGACT GGTCAACGAT 
CACCTGACCA GCTGCTTTCG CCATGCCGAG GTGGCGGCGG AGCGCCGGGG GCAGATGGAA 
TAG
 
Protein sequence
MPEAQAGGTR CPWARTPEEI AYHDTEWGVP VRDDRIHFEF LVLEAAQAGL SWLTILRKRE 
GYRRLFADFD PAAVARYTQA DVERLLGDAA IVRNRLKVEA AVHNARLFLD VQARHGSFDA 
FIWNFVDGRP VCNQWRELSQ VPATTPLSDT VSKELKRLGF KFVGSTVIYA HLQATGLVND 
HLTSCFRHAE VAAERRGQME