| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1880 |
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| Symbol | |
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| ID | 7173797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2312841 |
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| End bp | 2315651 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643540395 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_002436291 |
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| Protein GI | 218886970 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCGC CCTTTCCCCC ACGGTCCGCG CATGCCGCCA CAAGGCCCCC CCGCGCACGC
TACCTTTCCG TACCGCAACT GGTCACCGTG GTGGGCGTGG CCCTGCTGGC CCTGCTGGCC
CTGAGCGGGC CGCTGCGGGC CGCCAACACC GGCGGCACCG AACAGACAGA CCCGTACAAC
CCCGTCATGA ACGCCTACGT CGGCCAATAC GACACGGCCA GCTACGTCGG CATTGATGGC
GGGTACACCG GCAACGTCTA TGGTGGCCAA AGCTCTGGCA ACTTTGTCCA GGCCAACACC
GTGATCCTGA CCACCGGCAC GGTGACCGGC ACTGTTTACG GCGGCAGCAG CTGGAGCGAC
GAGGCCAAAC AAAACATCGT AACCCTGTAC GGCGCTCAGG TCGGCGAGTA CATCTTCGGC
GGGCATGTCC TTGCCGGCAC GAGTGCGGCC ACGGATAACA CCGTGAACAT AAATGGCGGC
ACGGTGGAGA GCGTGTACGG CGGCGCCTCT GCCTCCGGCA GCGCCCTGGA CAACACCGTG
ACCATAAATG GCCTGGGCAG CGCCTGGAGC CCAAATGGCG CCGTGGTGAA CTACGACGTC
TACGGCGGAT TCGTCGGCAA CGCCGCCGAC TCCTCCATCA CCGCAGCCTA CAACTCGGTG
AACATGAACG GCGGCATGGT GAGCGGCAAC ATCTACGGCG GCATGGTCGA ATCCGGCGCG
GGTGCGGCCA CGGACAACAC CGTGACAATG ACCTATGGCA CGGTGGCCGA GGACATTACC
GGCGGCGAAT CCACCTCCGG CCCGTCCAGG CGCAACGCCG TGATCATTTC CGGCGGCTCG
GTAAACGGAT ACGTCTACGG CGGCTATTCC TACTCCGGCG ATGCCACGGA CAACACCGTG
AACATCTCCG GCCTTGCTGC CGTGGGCGGC TACCTTTATG GCGGCTTAGC CGAATCCGGC
GGCGTCGCCA CGGGCAACAC CGTGACCATT TCCGGGGGCT CGGTGGACGG CGACGTGATC
AGTGGCAGCT CCGGCGTCGC CACGGGCAAC ACCGTGAACA TTTCCGGCGG CACGCTGGGC
CGCAACGTCT ACGGCGGCTT CGGCAGCTCT GGAACCGCCC AGGATAACGA CGTGAACATT
TCCGGCGGCA CGGTAGTCGG CTATGTCTAC GGTGGCCGAG CCGACGGCAG CGGCACCGCC
GCGAACAACG TAGTTACCAT TTCCGGCGGT ACGGTGCTCG GCTATGTCTA CGGTGGCCGC
GCCAGCGGCA GCGGCGACGC CTTGCTCAAC ACGGTGGCCA TTACCGGCGG CGAGTTGCAC
GACAACGTCT ATGGCGGCTC CTCCAACAAC AGCGACGCCA CGGGCAACAC CGTGCGCATC
GAGGGCACTC CCACCTTCGG GCCAACCAGC GCCCTGTACG GCGGCAATGC CAACACGGGC
ACCGGCGACG TGCGCACCGG CAACACCCTG GAAATGTGGA CCACGGGCGT TTCGGTAAAG
GGGCTGCACA ACTTCCAGAA CCTGTATTTC TTCCTGCCGT CCACCACCGC AGCGGGAAGC
ACCGTGCTCA CGGTGGCCGA CGCCGTGGAC ATCAGCACGC CCGCCACCGG TCCTTCCACG
GGCGCCACCA CCGTGGGCGT GGGCATCATG GGCGGCGGCG CCCCCACGCT GGCCACGGGT
GACAGTGTGA CCCTGATCAA GTCCAACACC GGCCTGACGG CTGACGCAGG CCTGACCAAC
ACCACCACGG GCATGCAGGG CATCTCCACC CTGTACACAT TCACGCTGGA GACCTCCGCC
GACGCCCTGG TCGCCCGTGT GGGCGAGGCC TCCAACACCC ATGAGGGCAT TCGCAAATCC
CCCTCCGAAG GACAGGCCGC CGGGGCGGCA GCCCTGACGC AGGGCGGCGA CCTGGCTGGC
GGGCAGGGCA TGACCAGCGC AAGGCAGGCG GCAGGTGCCG CCAGCGCGGG CGGGGCGGCG
CAAGGCGGCT GGGGCGGGTT TGGCTCCACC TCCGGCGGCA TGTCCACCTA CGCCACCGGT
TCGCATGTGG ACGCGCGAGG CGTGTCGATC ATGCTGGGCC TTGCCAAGCG CTTCGGGCTG
GACGGCGCGG ACCTGGTGGC CGGGCCGTTC TTCGAGGCGG GCGTGAGTTC GTACGACAGC
TACAACGACG GCCCCGGCGG CGACGATTCC ATTCACGCCT GGGGCGACAG CAACTACCAG
GGCGGCGGTC TGCTGGCACG GCTGGAGGCC ACGCAAGGCA TGCTCAAGGG CCTGTACGGT
GAAGTCTCGG CCCGCGCCGG CAGCCTGCAC ACCACCTACC GCAGCGACGA CCTGAACCCC
GCCCTGGGCC GGGCCTCGTA CCAGACCACC TCCGGCTACG TGGGCGCGCA CGGCGGCCTG
GGCTACGTGT GGGACATGGA CGAAAAGACC GACCTCGACG TGTACGGCAA GTACTTCTGG
ACCCGCACCG AGGGCAGTTC CGCAACCGTC CTTGGCGACG ACCTGGATTT CGACGCGGTG
GACTCGCAAC GGCTGCGCGC GGGCGCACGC CTGAGCCGCG ACCTTGCCGC CAACATCCGT
CCCTACGTGG GCGCGGCGTG GGACCACGAG TTCGACGGTT CCGCGCGCAG CACGTTGAAC
GGGCAAGGCG TGGCGGCCCC GTCGCTGGCC GGAGACACGG GCGTGGGCGA AGTGGGCCTG
GTGTGGAAGC CCTTCGAGGA CGGCGGCTTT TCCGTGGACC TTGGCGCACA GGGCTACGCC
GGCATGCGCC AGGGCTGGAG CGGCTCGCTG CAATTGAAGT ACGAATTCTG A
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| Protein sequence | MFPPFPPRSA HAATRPPRAR YLSVPQLVTV VGVALLALLA LSGPLRAANT GGTEQTDPYN
PVMNAYVGQY DTASYVGIDG GYTGNVYGGQ SSGNFVQANT VILTTGTVTG TVYGGSSWSD
EAKQNIVTLY GAQVGEYIFG GHVLAGTSAA TDNTVNINGG TVESVYGGAS ASGSALDNTV
TINGLGSAWS PNGAVVNYDV YGGFVGNAAD SSITAAYNSV NMNGGMVSGN IYGGMVESGA
GAATDNTVTM TYGTVAEDIT GGESTSGPSR RNAVIISGGS VNGYVYGGYS YSGDATDNTV
NISGLAAVGG YLYGGLAESG GVATGNTVTI SGGSVDGDVI SGSSGVATGN TVNISGGTLG
RNVYGGFGSS GTAQDNDVNI SGGTVVGYVY GGRADGSGTA ANNVVTISGG TVLGYVYGGR
ASGSGDALLN TVAITGGELH DNVYGGSSNN SDATGNTVRI EGTPTFGPTS ALYGGNANTG
TGDVRTGNTL EMWTTGVSVK GLHNFQNLYF FLPSTTAAGS TVLTVADAVD ISTPATGPST
GATTVGVGIM GGGAPTLATG DSVTLIKSNT GLTADAGLTN TTTGMQGIST LYTFTLETSA
DALVARVGEA SNTHEGIRKS PSEGQAAGAA ALTQGGDLAG GQGMTSARQA AGAASAGGAA
QGGWGGFGST SGGMSTYATG SHVDARGVSI MLGLAKRFGL DGADLVAGPF FEAGVSSYDS
YNDGPGGDDS IHAWGDSNYQ GGGLLARLEA TQGMLKGLYG EVSARAGSLH TTYRSDDLNP
ALGRASYQTT SGYVGAHGGL GYVWDMDEKT DLDVYGKYFW TRTEGSSATV LGDDLDFDAV
DSQRLRAGAR LSRDLAANIR PYVGAAWDHE FDGSARSTLN GQGVAAPSLA GDTGVGEVGL
VWKPFEDGGF SVDLGAQGYA GMRQGWSGSL QLKYEF
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