Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1860 |
Symbol | |
ID | 7173776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2277836 |
End bp | 2281483 |
Gene Length | 3648 bp |
Protein Length | 1215 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643540375 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein |
Protein accession | YP_002436272 |
Protein GI | 218886951 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 97 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA AAATGAAGAC CATGGATGGC AACACCGCTG CCGCGTACGT CGCCTACGCG CTCAGCGACA CCTCTGCCAT CTACCCCATC ACCCCTTCTT CCAACATGGG TGAATCGGCG GACGAATGGG CCGCCCAGGG CAAGAAGAAC CTTTTCGGGC AGACGGTTTC CGTCCGCCAG CTGCAGTCCG AAGCGGGTGC CGCGGGCGCC GTGCACGGCT CGCTGGCCGC AGGCGCGCTG ACCTCCACCT TCACTGCCTC GCAGGGCCTC CTGCTGATGA TCCCGAACAT GTACAAGATC GCCGGTGAAC TGCTTCCCGG CGTCTTCCAT GTTTCGGCCC GCGCGCTGGC CTCGCACGCG CTGTCCATCT TCGGCGACCA CCAGGACGTC ATGGCCGCCC GCCAGACCGG TTTCGCCTTC CTGAACTCCA ACTCGGTGCA GGAAGCCATG GACATGGCGC TGGTCGCCCA CCTGGCCGCC ATCGAGTCCA GCGTGCCGTT CTGCCACTTC TTCGACGGCT TCCGCACCTC GCACGAACTG CAGAAGATCG AAGTCATCGA ATACGACGAC ATGAAGAAGC TGGTAAACTG GGAGAAGGTG GAAGCCTTCC GCCAGAACGC CATGAACCCC GAGCACCCGC ACATCCGCGG CACTGCGCAG AACCCCGACA TCTACTTCCA GGCGCGTGAA GCCTGCAACT CGTTCTACAA TGCCGTGCCC GGCATCGTGT CGAACTACAT GAAGAAGGTC GGCGAAATCA CCGGCCGTTC CTACAAGCTG TTCGACTACG TGGGCCACCC CGAAGCCGAG CGCGTGATCA TCGCCATGGG TTCCGCCTGC GAAACCATCG AGGAAGTGGT CAACTTCCTG AACGCCAAGG GCGAGCGCGT GGGTCTGGTG AAGGTGCGCC TGTACCGTCC GTTCTCCATC GACCACATGC TGTCGGTGCT GCCCGCCACC GCCGACACCA TCACCGTGCT CGACCGCACC AAGGAAGCCG GTTCGCTGGG CGAACCCCTG TACCTTGACG TGTGTACCGC CTTCATGGAG CGCGGCGAAA TGCCCAAGCT CCTCGCCGGC CGCTACGGCC TGGGTTCGAA GGAATTCACC CCGGCCATGG CCAAGGCCGT GTACGACAAC ATGAAGGTTG TCGGCCCCAA GAACCACTTC ACCGTGGGCA TCATCGACGA CGTCACCGAC ACCTCGCTGG AAGTGACCGA AGGCGTCGAC ACCGTGCCCG CCGGCACCGT GCAGTGCAAG TTCTTCGGCC TTGGCGCCGA CGGCACCGTG GGCGCCAACA AGCAGGCCAT CAAGATCATC GGTGACAACA CCGGCATGTA CGCCCAGGGC TACTTTGCCT ACGACTCCAA GAAGTCGGGC GGCTTCACCG TGTCGCACCT GCGCTTCGGC AACAGCCCCA TCCAGTCCAC CTACCTGGTC AACAGCGCCG ACTACATCGC CTGCCACAAG TCGGCCTACG TGCACCAGTA CGACGTGCTC GACGGCATCA AGACCGGCGG CACCTTCGTG CTGAACTCGC ACTGGAACAG CGTGGAAGAG ATGGAGAAGG AACTGCCCGC CTCCATGCTG CGCACCATCG CCCGCAAGAA GCTGAAGTTC TACAACGTGG ACGCCGTGAA GGTTGCCACC GAAGTAGGCC TTGGCGGGCG CATCAACATG ATCATGCAGA CCGCGTTCTT CAAGCTGTCC AGCGTGATTC CCTTCGAGCA GGCCGTGGCG CTGCTGAAGG ACTCCATCCA CAAGGCCTAC GGCAAGAAGG GCGAAAAGAT CGTGGCCATG AACGTGGCCG CCGTTGACAA GGCCATCGAG GCCGTCACCG AGATCAAGTA CCCCGAATCT TGGGCCACCG CCGCCGACGC CGCTCCCGTA GCCAACGCGG ACCCCGACTT CATCACCAAC GTGGTGCGTC CCATCCTGGC CCAGCAGGGC GACAAGCTGC CGGTTTCGGC CTTCGAGCCC GACGGCCTGT TCCCGGTGGG CACCGCCGCC TTCGAAAAGC GCGGCGTGGC CATCACCGTG CCCGAGTGGC TGTCCGAAAA CTGCATCCAG TGCAACCAGT GCTCGTTCGT GTGCCCGCAT GCGGCCATCC GCCCCATCCT GGCCTCTGAT GAGGAACTGG CCGGCGCGCC CGCCTCGTTC GTGGCCATCG AAGCCAAGGG CAAGGAACTG AACGGCCTGA AGTACCGCAT GCAGGTCTAC GCCCAGGACT GCATGGGCTG CGGCTCGTGC GCCGACGTCT GCCCGGCCAA GAACAAGGCC CTGGTCATGA AGCCCATCGA AACCCAGATG GCCGACCAGG TTGCCAACCT TGCCTATGCC GACGCCAACA TCGCCATCAA GGACACCCTG ATGGCCCGCG ACAGCCTGAA GGGCTCGCAG TTCCAGCAGC CGCTGATGGA ATTCTCCGGC GCCTGCGCCG GCTGCGGTGA AACCCCGTAC GTCAAGCTGC TTACCCAGAT GTTCGGCGAA CGCATGGTGG TGGCCAACGC CACCGGCTGC TCGTCCATCT GGGGCGCTTC CGCCCCCACC ACGCCGTACA CCACCAACAA GGACGGTCAC GGCCCGGCCT GGGGCAACTC GCTGTTCGAA GACGCCGCCG AATTCGGCTA CGGCATGGCC ATGGCCTACA ACCAGCGCCG CGCCAAGCTT GCCGACGTGG TGAGCGAAGC CCTGACCCTG GACCTGGACG CCGACCTGAA GGCCGCCCTG CAGGGCTGGC TGGACAACAA GGACGACGCC GAAGGCTCCA AGAAGTACGG TGAAGAAATC CTTGGCCTGC TTGGCGGCGC GGACGACCAT CCGCTGCTGG ACGAGCTGTG GCACATGAGC GACCAGTTCA CCAAGAAGTC CGTGTGGATC TTCGGCGGTG ACGGCTGGGC CTACGACATC GGCTACGGCG GCGTGGACCA CGTGCTGGCC AGCGGCGAGG ACATCAACAT CCTGGTCATG GACACCGAAG TGTACTCCAA CACCGGCGGC CAGGCCTCCA AGGCCACCCC GCTGGGCTCC ATCGCCAAGT TCGCCGCCTC GGGCAAGAAG ACCGGCAAGA AGGACCTTGG CCGCATGGCC ATGACCTACG GCTACGTCTA CGTTGCCTGC GTCTCCATGG GCGCCAACAA GCAGCAGGTG CTGAAGGCCT TCAAGGAAGC CGAAGCCTAC AAGGGCCCCT CGCTGATCAT CGCCTACGCC CCCTGCATCA ACCAGGGCCT GCGCAAGGGC ATGGGCAAGT CCATGGAAGA AGCCAAGATG GCCGTGGAAT CCGGCTACTG GCCCCTGTAC CGCTTCAACC CCGAACTTGC CGAAGAAGGC AAGAACCCGT TCGTGCTCGA ATCGAAGGCG CCCAACGGCA CCATGCAGGA ATTCATGGCT GGTGAAACCC GTTACGCCGC CCTCGAAAAG ATCGCTCCCG AAGAGTCCAA GCGCCTGCGC GCGGCCATCG AGAAGGAGTA CAACGAACGT TACCTGCTGC TGAAGCAGAT CTCCGAAGCG CCCGCCGTTA CCGCCCCCGC CGGGGACCCG GTGACCGTGG GAAACGGGGA TAGCGGCTTC TGCGCCGTGA CCGAAACGCC GGAACACGCC CGCCGCAAGG GCGGGGATGC CTGCGACGAC GGCCGGGCCG CTGAATAA
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Protein sequence | MAKKMKTMDG NTAAAYVAYA LSDTSAIYPI TPSSNMGESA DEWAAQGKKN LFGQTVSVRQ LQSEAGAAGA VHGSLAAGAL TSTFTASQGL LLMIPNMYKI AGELLPGVFH VSARALASHA LSIFGDHQDV MAARQTGFAF LNSNSVQEAM DMALVAHLAA IESSVPFCHF FDGFRTSHEL QKIEVIEYDD MKKLVNWEKV EAFRQNAMNP EHPHIRGTAQ NPDIYFQARE ACNSFYNAVP GIVSNYMKKV GEITGRSYKL FDYVGHPEAE RVIIAMGSAC ETIEEVVNFL NAKGERVGLV KVRLYRPFSI DHMLSVLPAT ADTITVLDRT KEAGSLGEPL YLDVCTAFME RGEMPKLLAG RYGLGSKEFT PAMAKAVYDN MKVVGPKNHF TVGIIDDVTD TSLEVTEGVD TVPAGTVQCK FFGLGADGTV GANKQAIKII GDNTGMYAQG YFAYDSKKSG GFTVSHLRFG NSPIQSTYLV NSADYIACHK SAYVHQYDVL DGIKTGGTFV LNSHWNSVEE MEKELPASML RTIARKKLKF YNVDAVKVAT EVGLGGRINM IMQTAFFKLS SVIPFEQAVA LLKDSIHKAY GKKGEKIVAM NVAAVDKAIE AVTEIKYPES WATAADAAPV ANADPDFITN VVRPILAQQG DKLPVSAFEP DGLFPVGTAA FEKRGVAITV PEWLSENCIQ CNQCSFVCPH AAIRPILASD EELAGAPASF VAIEAKGKEL NGLKYRMQVY AQDCMGCGSC ADVCPAKNKA LVMKPIETQM ADQVANLAYA DANIAIKDTL MARDSLKGSQ FQQPLMEFSG ACAGCGETPY VKLLTQMFGE RMVVANATGC SSIWGASAPT TPYTTNKDGH GPAWGNSLFE DAAEFGYGMA MAYNQRRAKL ADVVSEALTL DLDADLKAAL QGWLDNKDDA EGSKKYGEEI LGLLGGADDH PLLDELWHMS DQFTKKSVWI FGGDGWAYDI GYGGVDHVLA SGEDINILVM DTEVYSNTGG QASKATPLGS IAKFAASGKK TGKKDLGRMA MTYGYVYVAC VSMGANKQQV LKAFKEAEAY KGPSLIIAYA PCINQGLRKG MGKSMEEAKM AVESGYWPLY RFNPELAEEG KNPFVLESKA PNGTMQEFMA GETRYAALEK IAPEESKRLR AAIEKEYNER YLLLKQISEA PAVTAPAGDP VTVGNGDSGF CAVTETPEHA RRKGGDACDD GRAAE
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