| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1858 |
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| Symbol | |
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| ID | 7173774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2272085 |
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| End bp | 2275660 |
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| Gene Length | 3576 bp |
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| Protein Length | 1191 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643540373 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002436270 |
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| Protein GI | 218886949 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 95 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACCG TGCTGGCGGC GCTGGCCCTT TTGCTGTGCC TGTCACTGGG TCTGGCATCA
TCTCCGACAT CGGCACCCAC GCCCGGCGCG TTGCTGCCCG TCAGCCCCGC GCCCGCCTGG
GCCCAGACTT CACACCCCGC CCAGTCGGCC CAGCCGCCGG ACACCGCCAC GTCCGCCACC
GGCGCCTCCG GCTCGCTGGG CACGCAGGAA GGCGCGCGCA AGAACGTGCT GTACCTGAAC
TCGTACCACA ACGGGTATGC CTGGTCCGAC CACATCCAGG AGGGCATCCG CCAGACGCTG
GCCGAAAGCC CGTACAGCAT CGTGTTCCAG GTGGAATACA TGGACTCCAA GAAGTTCCAC
TACCAGGACA CGGTTTCCAC CCTGTACGCC CTGTATCGCG ACAAGTTCCG CAACAAGAAG
TTCGACATCA TCATCGCCTC GGACAACGTG GCGGTGGATT TCCTGCTCCA GTTCGGCGAA
GAGCTGTTCC CCGGCGTGCC CATCGTGTTC TGCGGACTCA ACGACGTGCA GCCCGAAACC
CTGCGCGCCA CCGGGCGCGA GATGACCGGG GTGCTCGAAA ACTACGACGT GGCCTACAAC
ATAGAACTGG CCCTGCGCCT GAACCCGCAG CTGCGGCGCA TGGTGATCAT CGGCGACGAC
TCGGTAACCG GCGCGGCCAT CCGCAACCAG GTGCTGGCCC AACTGGGGCC GTTCAGGGAC
CGCCTGGTGG TGGAGGAGTG GAGCGACTAC AGCCTGGACC AGATGCTGGA CTGGGTGCGC
GACCAGAGCC CGGACACCTT CTTCTACTTC GTGCCCATCT ACCGCGACAT CGACGGCCAG
TTCTATTCGG CGGAAGAACT GCTGGAAAAG GTGCACGCCG CCTCGCGCGC GCCGCTGTAC
AGCAACTGGG CCTTCCTGCT GGGGCACGGC ATCGTGGGCG GCAAGCTCAT CTCGGGGGTG
CGCCACGGCG AAATGGCCGC GCGCATGGCC CTGCAGGTGC TGAGCGGCAT CCACGCCTCG
TCCATCCCCA TCGTGGAGCA GGCCGACCAG GCCTTCATGT TCGACAACAA CGAGTTGCAG
CGGCTGTTCA TCAGCCCCTC GCAACTGCCG CCCGACCGCA TCATCATCAA CGAGCCCAGC
AGGTTCTACG AACTGAACAA ACAGGTCTTC TGGACCATCA TCGTCAGCAT GGTCATCCTG
TCGGTGACCC TGGTGCTGCT GGTCATGAAC ATCCTGGAAA AGCGGCGGGT GGAAGGCAAG
ATCAAGGACC AGCTGTCGTT CCTGCGCTCG CTGATGGACA CCATCCCCAT CCCCATCTAC
AGCAAGGACG CCGATGGCCG GGTGCGCGAA TGCAACGTGG CCTTCGAACG CTTTTTCGGG
GTGGACCGCG AGGCGCTGCT GGGCCGCTAC GAATGGCAGG CCGGGCCGGA AGGCGTGGCC
ATGCTGCGCG ACGCCTCGGA CAGCAGCCTG ATGCACGAGC CGGGCGTGGC CAGCTATGAA
ACCACCCTGC CCGGCCCCGA GGGTTCGCCC CATTCCATCA TCATGCACAA GGCCACCTAC
CGCAATTCCA GGGGGGCGGT GGCGGGCCTG GTGGGCGTGG TCTTCGACTA CACCGACCGC
AAGAAGGCAG AGGACCGGTT GCGCGCCGCC GAGGAAAAAT ACCGCTCGCT GTTCGAAAGT
TCGCCTCTCG GCATCTTCCG CGTCACCCCG GAGGGCGACT ACCTGGACGC CAACCCGGCC
ATGGCGCGCA TGTCGGGCTT TGCCTCGCCG GCCCTGCTGC TGGCGTCGGG CGCGGGCACC
TTTGCCCGGC TGCACGACGC GCCGGACATG TCCTGTGCCG GCTCGGACTC CGGTCCGGGC
ACGGGACAGG ACACGGTGAT CTCGTTCGAT TCCAGCGTGG AGCGGCCCGG CGGCGGCACC
GTGACCATGC ACCTGACCAT GCGCCCCCAG CGCGACGAGG CAGGCATGGT CCGCCACATT
GAGGGCTATG CGGAAGACAT CACCCAACGC AAGGCTGCGG AGCGCGCCCT TTCCGCCTCG
CAGCGCATGT TGCAGCTGGT GCTCGATAAC ATTCCCCAGT TCGTCTACTG GAAGGACCGC
GACCTGAAGT ACATGGGCGC CAACAAATCC TTCCTCGGTT TCGTGGGGCT GGACAGCGCC
GATGCGCTGC TGGGCCGCAC CGACGAGGAG GTGCTGCCCT CCGCCGAGGA CGCCGCCCGC
GTGCACCACG ACGACGAGGC CGTGGTGCGC TCCGGCCAGC CGCGCTACCA GACCAAGGTC
ACCATCACCT CGCCCGGCGG CGAGGCGGTG TGGCTGGAAA CCAACCGTGT GCCCCTGCTG
AGCGACCGTG GCAGCCAGGC CGAAGGAAGC GGCGACGACG TGGTGGGCCT GCTGACCACC
GCGGAAGACG TCACCCAGCG CATCCGGCTG GAACGCCAGC TGCTCCAGTC GCAGAAGATG
GAGGCCATCG GCACGCTGGC GGGCGGCATC TCGCACGATT TCAACAACAT TCTTACATCG
ATCATCAACT CCATCGAGCT GGCCATCAGC GACATCGCGG CGGATTCGCT GACCTGCAAC
GACCTGATGC GCGCCCTGAA GGCCGCCCAG CGCGGCAGCC GCCTGGTCAA GCAGATCCTG
ACCTTCAGCC GCCCCTCGGT GGAAGGCTTC GTCATCACCG ACATCAACGA GGTGCTCACC
GAGGCGCTGG TGCTCATCAA GGCCTCGCTG CCCCGCAACA TAGAGATCCG CAAGGCCATT
CCGCCGCGCC CGTCCGTGAC ACGGGCGGAC CCCACCCAGA TTCACCAGGT GCTCATGAAC
CTGTGCACCA ACTCGTTCCA GGCCCTGCGC GACACGGGCG GCGTGCTGGA GGTGAACCTG
GAGCAGGAGA TGCTGTCCGA CGAACGCGCG CTGGAACTGG GCATGGAACC GGGCTGCGCC
CTGCGCCTGA CCGTGGCCGA CGACGGCCCC GGCATTGCGC CGGAAATCGT GGACAAGATC
TTCGACCCGT TCTTCACCAC CAAAGGCAAG ACCGAAGGCA CCGGCCTCGG CCTTGCGGTG
GTGCACGGCA TCATCAAGGG GCACCGGGGC GCGGTGCGCG TTGCCAGCGT ACCGTGGCGG
CGCACGGAAT TCGAGATCTA CCTGCCCATG CACGCGCAGG ACGCCTGCCT CATCGACCCG
GCCCTGCTGG CCCCGGAAAC GGGCAGCGAG CGCATCCTGT TCGTGGAGGA CGACGACGAC
CAGCTGCACA CCATTCCGAG GGTGCTCGAG AGCCTCGGCT ACACCGTGCG ACCGTTCAAG
AACCCGCTGC TGGCGCTGGC CGCCGTGCGC GAACACCCCG CCTCGTTCGA CCTCGTCATC
ACCGACTTCG ACATGCCGGA GGCAAACGGC CTTGAGCTTG CCCGCAAAAT GGGCGATATT
GCACCGAACA TGCCTATAAT CCTCGTTTCG GGCCGCGAGG TGGCAGCCGA AGGGGCGGCT
GTCGCCGGAA ACATCAAGGC CATGGTCCAC AAGCCGTACA ACCGGAACAT CCTGGCCGAC
GCCATCCGCC GGGTGTTCGC CCGGCTGGGG AGCTAG
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| Protein sequence | MVTVLAALAL LLCLSLGLAS SPTSAPTPGA LLPVSPAPAW AQTSHPAQSA QPPDTATSAT
GASGSLGTQE GARKNVLYLN SYHNGYAWSD HIQEGIRQTL AESPYSIVFQ VEYMDSKKFH
YQDTVSTLYA LYRDKFRNKK FDIIIASDNV AVDFLLQFGE ELFPGVPIVF CGLNDVQPET
LRATGREMTG VLENYDVAYN IELALRLNPQ LRRMVIIGDD SVTGAAIRNQ VLAQLGPFRD
RLVVEEWSDY SLDQMLDWVR DQSPDTFFYF VPIYRDIDGQ FYSAEELLEK VHAASRAPLY
SNWAFLLGHG IVGGKLISGV RHGEMAARMA LQVLSGIHAS SIPIVEQADQ AFMFDNNELQ
RLFISPSQLP PDRIIINEPS RFYELNKQVF WTIIVSMVIL SVTLVLLVMN ILEKRRVEGK
IKDQLSFLRS LMDTIPIPIY SKDADGRVRE CNVAFERFFG VDREALLGRY EWQAGPEGVA
MLRDASDSSL MHEPGVASYE TTLPGPEGSP HSIIMHKATY RNSRGAVAGL VGVVFDYTDR
KKAEDRLRAA EEKYRSLFES SPLGIFRVTP EGDYLDANPA MARMSGFASP ALLLASGAGT
FARLHDAPDM SCAGSDSGPG TGQDTVISFD SSVERPGGGT VTMHLTMRPQ RDEAGMVRHI
EGYAEDITQR KAAERALSAS QRMLQLVLDN IPQFVYWKDR DLKYMGANKS FLGFVGLDSA
DALLGRTDEE VLPSAEDAAR VHHDDEAVVR SGQPRYQTKV TITSPGGEAV WLETNRVPLL
SDRGSQAEGS GDDVVGLLTT AEDVTQRIRL ERQLLQSQKM EAIGTLAGGI SHDFNNILTS
IINSIELAIS DIAADSLTCN DLMRALKAAQ RGSRLVKQIL TFSRPSVEGF VITDINEVLT
EALVLIKASL PRNIEIRKAI PPRPSVTRAD PTQIHQVLMN LCTNSFQALR DTGGVLEVNL
EQEMLSDERA LELGMEPGCA LRLTVADDGP GIAPEIVDKI FDPFFTTKGK TEGTGLGLAV
VHGIIKGHRG AVRVASVPWR RTEFEIYLPM HAQDACLIDP ALLAPETGSE RILFVEDDDD
QLHTIPRVLE SLGYTVRPFK NPLLALAAVR EHPASFDLVI TDFDMPEANG LELARKMGDI
APNMPIILVS GREVAAEGAA VAGNIKAMVH KPYNRNILAD AIRRVFARLG S
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