| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1829 |
|---|
| Symbol | |
|---|
| ID | 7173745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2231969 |
|---|
| End bp | 2233531 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643540344 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002436241 |
|---|
| Protein GI | 218886920 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 92 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA CTCTCGTACT GCTTCTGATG ATGTTGGCGG CCGTGCTGGC GTTCGGCCCC
AAGGCCGAAG CCGCGGAAGG CAAGACCTTC CGCGTCGGCA TCTCGTCCGA CCCTGAATCG
CTCGATCCGC ACATGCAGCT TTCCGGGCCC ATGCTGGCGT ACTCGCACTG GGTGTTCGAT
CCCCTGGTGC GCTGGACCCA GGACATGAAG TTCGAGCCGC GCCTGGCCGA AAAGTGGGAG
CAGATCAACC CCACCACCAT GCGCTTCCAC CTGCGCAAGG GCGTCAAGTT CCACAGCGGC
AACCCGCTCA CCGCCGCCGA CGTGGCCTGG ACCGTCAAGC GCCTGAAGGA ATCCCCCGAC
TTCAAGGGCC TGTACGTCAA GTTCGCCGAG CCCAAGGTGG TGGACGACAA CACCATCGAC
ATCATCACCA CCGAGCCCTA CGGCCTGGTG ATGAACCTTG CCACCTACAT CTTCCCCATG
GACTCCAAGT TCTACTCCGG CACCGACGCC GCCGGCCAGC CCAAGGGCGC CGTGGTGAAG
AACGGCGCCT CGTTCGCCAA CGAGAACGCC TCGGGCACCG GCCCGTTCAT GGTGGCCCAG
CGTGAACACG GCGTGAAGCT GGTGCTGAAG GCCAACCCCA ACTACTGGGG CAAGCACGGC
AACGTCGACA CCATCGAACT TACCCCCATC AAGAACGAAG CCACCCGCGT GGCCGCCATC
CTGAAGGGCG ACGTGGACTT CATCACCCCC GTGCCCGTGC AGGACTACGA CCAGTTGGCC
AAGAACCCCG ATGTGGAGCT GATCACCATG GCCAGCACCC GCATCATCAC CTTCCAGCTG
AACCAGAAGC GCAACCCCGC CCTGGCCAAC CCCAAGGTGC GTGAAGCCAT CATCGCCGCC
ACCGACCATG CGGGCATCGT GGCCAAGATC ATGAAGGGCT ACACCGTGGT CACCCAGCAG
CAGGCGCCCA AGGGCTACCC CGGCTACATC GCCGACCTGA AGCCCCGCTT CGACCTGGCC
AAGGCCCAGA AGCTGATGAA GGAAGCGGGC TACGAGAAGG GTCTGGAACT GACCATGATC
GCGCCCAACA ACCGCTACGT GAACGACGAA AAGGTGGCCC AGGCCTTCGT TTCCATGATG
GCCAAGATTG GCATCAAGGT GAACCTGAAG ACCATGCCCA AGGCCCAGTA CTGGGATGAG
TACGACGCCC AGGTTGCCGA CATCCAGATG ATCGGCTGGC ACCCGGATAC CGAAGACACC
GCCAACTACG GCGAATACCT GCTGATGTGC GCCAACAAGG ACACCGGCAT GGGCCAGTAC
AACAGCGGCA ACTACTGCAA CAAGAAGTAC GATGCGCTGA TCGAGGAAGC CAACCGCACC
ACCGATCCCA AGAAGCGCGA CGCACTCCTG CAGGAATCCG AGAAGCTGGC CTACGACGAG
GCCGCCTTCG TGCCGCTGCA CATGGAACCG CTGTCGTGGG CTGCCCGCAA GACGGTGACG
AACGCCAAGG CGATCATCAA CGTGCAGGAC TTCCCCTATT TCGGCGACGT GGTGATGAAG
TAA
|
|---|
| Protein sequence | MKRTLVLLLM MLAAVLAFGP KAEAAEGKTF RVGISSDPES LDPHMQLSGP MLAYSHWVFD
PLVRWTQDMK FEPRLAEKWE QINPTTMRFH LRKGVKFHSG NPLTAADVAW TVKRLKESPD
FKGLYVKFAE PKVVDDNTID IITTEPYGLV MNLATYIFPM DSKFYSGTDA AGQPKGAVVK
NGASFANENA SGTGPFMVAQ REHGVKLVLK ANPNYWGKHG NVDTIELTPI KNEATRVAAI
LKGDVDFITP VPVQDYDQLA KNPDVELITM ASTRIITFQL NQKRNPALAN PKVREAIIAA
TDHAGIVAKI MKGYTVVTQQ QAPKGYPGYI ADLKPRFDLA KAQKLMKEAG YEKGLELTMI
APNNRYVNDE KVAQAFVSMM AKIGIKVNLK TMPKAQYWDE YDAQVADIQM IGWHPDTEDT
ANYGEYLLMC ANKDTGMGQY NSGNYCNKKY DALIEEANRT TDPKKRDALL QESEKLAYDE
AAFVPLHMEP LSWAARKTVT NAKAIINVQD FPYFGDVVMK
|
|---|
| |