Gene DvMF_1825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1825 
Symbol 
ID7173741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp2227464 
End bp2228483 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID643540340 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002436237 
Protein GI218886916 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC AGATCACCGC ACTGCTTTCG CTGCGCAACG TCGTCAAGCA TTTCGACATT 
TCCGGCGGGC TGCTGGACCA GCTGCGCATT TCCGGTGGCC GCATCACCCG CAAGCGCACC 
GTGGTGCATG CCGTCAACGA CGTGAGCTTC GACATCCTGC CCGGCGAGAC CCTGAGCGTG 
GTGGGCGAAT CGGGCTGCGG CAAGTCCACC CTGGCGCGCA CCGTCATCGG CCTGTACCGG 
GCCACCGGCG GCGAAATCCT GTACCGGGGC GAGCGCATCG ACAACCTGAG CGACAACGGC 
ATGCTGCCCT ACCGCACCCG CATGCAGATG GTCTTTCAGG ATCCCTACGC CTCGCTGAAC 
CCGCGCATGA AGGTGCGCGA GATTCTGGAA GAGCCGGTGC GCTTCCACAA CCCCGGCATC 
TCCGACGCCG ACGTGCGCGC CCGCGTGGCC GACGTCATGG AACAGGTGGG CGTGAACCCG 
CTATGGGGCG TGCGCTACCC GCACGAATTC TCCGGCGGGC AGCGCCAGCG CATCTCCATC 
GCCCGCGCCC TGGTTGTAGA CCCCGAGTTC ATCGTGGCGG ACGAGCCCAT CTCTGCGCTG 
GACGTGTCCA TTCAGGCGCA GGTGCTCAAC CTGATGATGG ACATGCAGGA GAAGCGCAAC 
CTGACCTACC TGTTCATCAG CCACGACCTT TCGGTGGTGG AGCACATCTC CACCCGCGTG 
GCCGTGATGT ACCTGGGCAG CCTGTGCGAA CTGGCCAGCG CCGAAGACCT GTTCGGCAAC 
CCGCGCCACC CGTACACCCG GGCCCTGCTG TCGGCCATCC CGCGCATCGG CGGCAAGGCC 
GCCGGGCACA TCAAGCTGTC CGGCGACGTG CCCACGCCCA TCAACCTGCC CACGGGCTGC 
GTGTTCCATG GCCGATGCCA GCACGCCAAC GCGCGCTGCA TGCAGGAAGT GCCCAAGGCC 
CGCCAGCTTG AAGGCGGCGC GCAGGTGGCC TGCCACGGCG TGGAGGAAGG GCGGATTTAG
 
Protein sequence
MTNQITALLS LRNVVKHFDI SGGLLDQLRI SGGRITRKRT VVHAVNDVSF DILPGETLSV 
VGESGCGKST LARTVIGLYR ATGGEILYRG ERIDNLSDNG MLPYRTRMQM VFQDPYASLN 
PRMKVREILE EPVRFHNPGI SDADVRARVA DVMEQVGVNP LWGVRYPHEF SGGQRQRISI 
ARALVVDPEF IVADEPISAL DVSIQAQVLN LMMDMQEKRN LTYLFISHDL SVVEHISTRV 
AVMYLGSLCE LASAEDLFGN PRHPYTRALL SAIPRIGGKA AGHIKLSGDV PTPINLPTGC 
VFHGRCQHAN ARCMQEVPKA RQLEGGAQVA CHGVEEGRI