Gene DvMF_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1789 
Symbol 
ID7173705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp2189202 
End bp2189846 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID643540304 
Productphosphatidylserine decarboxylase 
Protein accessionYP_002436201 
Protein GI218886880 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.109391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAG CCTCCATCGG CATCACCCCC GAAGGCGTCC CGGCCATCGG CCTGTGCGCC 
CTCGTCACGC TTTCCCTCGC CATGCTCGGC TGCGCCACCG GCAGCTTCGT GTTCATGCTG 
CTGACCTGGT TCTGCTGCCA CTTCTTCCGC GATCCGGAGC GGGTAACCCC CACTGCGCCC 
GGCCTTGCCG TCAGCCCCGC CGACGGAAAG GTGGTGCGCG TGCAGACCAT GCCCGACCCG 
TTCACCGGCC AGCCGCGCAC CGCGGTGTGC ATCTTCATGA ACGTGTTCAG CGTGCACGTG 
AACCGCGCCC CGGTTGCGGG CACCGTGACC GGCATTGCCT ATCATCCCGG CAAGTTCCTG 
AACGCGGCAT GGGACAAGGC CTCCACCGAC AACGAGCGCT GCGCCTACCA GATGACCGAG 
GAAGGCGGCT CCGCCTGGAC CTTCGTGCAG ATCGCGGGGC TGATCGCCCG GCGCATCGTG 
TGCCGCACCG ATGAAGGCGA CGTGCTGGCC CGTGGCGAAC GCTTCGGCAT GATCCGCTTC 
GGTTCGCGGG TTGACCTTTA CCTGCCGGAC GACTATTCTC CGGCGGTGAA CGTGGGTGAA 
CAGGTGTTCG CCGGGCAGAC CATAGTGGCG CGCCGCAACG CCTAA
 
Protein sequence
MRKASIGITP EGVPAIGLCA LVTLSLAMLG CATGSFVFML LTWFCCHFFR DPERVTPTAP 
GLAVSPADGK VVRVQTMPDP FTGQPRTAVC IFMNVFSVHV NRAPVAGTVT GIAYHPGKFL 
NAAWDKASTD NERCAYQMTE EGGSAWTFVQ IAGLIARRIV CRTDEGDVLA RGERFGMIRF 
GSRVDLYLPD DYSPAVNVGE QVFAGQTIVA RRNA