| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1763 |
|---|
| Symbol | |
|---|
| ID | 7173679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2159518 |
|---|
| End bp | 2160684 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643540279 |
|---|
| Product | sigma54 specific transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002436176 |
|---|
| Protein GI | 218886855 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 97 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCA GAAATTTTCC GCATACCGGC AACAAATTGC CGGGCGATGG CCAGGATGGT
CCTCATTTCG AAACGTTGCA GAACGGAACG GGGTTTCTCC TGTTGTCCGG AGACATGCTG
CGCCTGAAAC AGCTGGCGGT TCAGGTGGCC TCGTCGGACG CGCCCATCCT GATCCACGGC
GAGACGGGTA CCGGCAAGGA ACTGTTCGCG CGGCTCATCC ACGACATGAG CGTGCGGGCG
CGCAAGCCTT TCGTGGCCGT GAACTGCGGC GTGCACGAGG GCGAACTGTT CGCGGACAAG
TTTTTCGGGC ACGAGCAGGG AGCCTTTACC GGCGCGCATC GCACCAGTCA GGGCTGTTTC
GAGCTGGCCG GAGACGGCAC GCTGTTTCTG GACGAGGTGG GAGAGATTCC GCCCGCCAAC
CAGGCGGACT TTCTGCGGGT GCTGGAAGAG CGCAAGTACC GGCGCATCGG CGGGCAGCGG
GACATTCCGT TCCAGGCGCG CATCATTGCC GCGTCCAACC GCGAATTGCC GGACATGGTG
CGCGAGGGGC GGTTCCGGGC GGACCTGTTC TTTCGCCTGA ACGTGATCCC GGTGTCGTTG
CCGCCGCTGC GGGCGCGGCG CGAGGAGATC GTGCCGCTGG CCCGGCATTT TCTTGCCCAT
TATGCAGAGA AGTACCACCG GCACGGGCTG CGCTTTCGCC CGGAGACCGA GGCGGGGCTG
AGCGGCTATC CGTGGCCGGG CAACGTGCGC GAACTGAAGA ACCTAGTGGA ACGGCTGGCC
CTGCTGGCCC CGGATGGAGA CATCGGGCCG GAGCACCTGC CGCTGGAACT GCGGTCGGCT
GTGGCCCTGG GGGCCGCGGG CGTGGGCGGG GCGGGCGGAT ACGCCGGTGG CGGCGTGTCC
GGCGTTGCAT CAGGCGGGGC GGGAAACGGC AACGGGAACG GCAACGGCGG CGGCATGCCG
GGCGGAGACC TGGCCATCCA TGCCGTGCAC CCGGCGGGCA TGGGCGAAGA CCTCAGTCTG
GATGTGGCCC GGCGCGAGGC CGAGGTGCGC GTGATCCTGA AGGCCATGCG TGCCAGCGGC
GGCAACAAGG GCGAGGCCGC GCGCCTGCTT GGCGTCAGCC CGCGTACCCT GCGCTACAAG
TTCAGCGAGT ACGGATTGCG GTTCTAG
|
|---|
| Protein sequence | MDGRNFPHTG NKLPGDGQDG PHFETLQNGT GFLLLSGDML RLKQLAVQVA SSDAPILIHG
ETGTGKELFA RLIHDMSVRA RKPFVAVNCG VHEGELFADK FFGHEQGAFT GAHRTSQGCF
ELAGDGTLFL DEVGEIPPAN QADFLRVLEE RKYRRIGGQR DIPFQARIIA ASNRELPDMV
REGRFRADLF FRLNVIPVSL PPLRARREEI VPLARHFLAH YAEKYHRHGL RFRPETEAGL
SGYPWPGNVR ELKNLVERLA LLAPDGDIGP EHLPLELRSA VALGAAGVGG AGGYAGGGVS
GVASGGAGNG NGNGNGGGMP GGDLAIHAVH PAGMGEDLSL DVARREAEVR VILKAMRASG
GNKGEAARLL GVSPRTLRYK FSEYGLRF
|
|---|
| |