| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1758 |
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| Symbol | |
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| ID | 7173673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2146637 |
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| End bp | 2150371 |
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| Gene Length | 3735 bp |
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| Protein Length | 1244 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643540273 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002436171 |
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| Protein GI | 218886850 |
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| COG category | [L] Replication, recombination and repair
[S] Function unknown |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGT TCCGGGCCGA CCTGCACATC CACTCCCGCT TTTCGCGCGC CACCAGCGGT
CGGCTCAACG CCCGCCATCT GGCCGCGTGG GCGCGGGTGA AGGGGCTGGA CGTGCTCGGC
ACCGGCGACT TCACGCACCC CAGGTGGCGT GCGGAACTGG CCGAACAACT GGTGCCGGAC
GAGGCCAGCG GCCTGTACCG CCTGCGCGAC CCGCGCGGGC TGGATGCCGA ACTGCCCGAA
TACGCGGGCA AGCCGCTGGC CGGGCGCACC CTGTTCATGC TCCAGGCCGA AATCAGCAGC
ATCTACAAGC GCGGCGGAAA GGTGCGCAAG GTGCACAACC TTGTCTACGT GCCCGACATG
GACGCCGCCG ACCGCCTGTC GCGCCGCCTG GCAGAGGTGG GCAACATAGA GTCCGACGGG
CGGCCCATCC TTGGGCTGGA TTCGCGCAAC CTGCTGGAAA TGGTGCTGGA AACGCACCCG
CAGGCCTTTC TGGTGCCCGC GCACATCTGG ACGCCGTGGT TCGCCCTGTT CGGCTCGAAA
TCGGGCTTCG ATTCGGTGGC GGAATGCTTC GGCGACCTGT CGTCCGAAAT CTTCGCCATG
GAAACGGGCC TGTCGTCCGA CCCGGAGATG AACTGGCTGT GGAGCGAACT GGACCGCTTT
GCGCTCATCT CCAATTCCGA CGCGCATTCC GGCGAAAACC TGGGGCGCGA GGCCAACCTG
TTCTCCGGCG AGATCGGCTA CGAAAGCATC CTGCGCAGCC TGAAGGGGCA GGGCATTGGC
GGACGCTTTC TGGGCACGCT GGAATTCTTT CCCGAGGAAG GCAAATACCA CCTGGACGGC
CACCGCAAGT GCGGCGTGGT CATGGAGCCG CGCGAAACCC GCGCCCGCGG CGGGCTGTGC
CCGGTGTGCG GCAAGCCGGT GACCGTGGGC GTGCTGCACC GGGTGGTGGA ACTGGCCGAC
CGCGAAACGC CCATCCAGTC GCCGGGGCAG CAGGGCTACC TTTCGCTCAT CCCCCTGCCG
GAAATCCTGG GCGAACTGCT GGGCGTGGGC GCCAAGAGCC GCAAGGTGGC GGAACAGCAC
GCCCGGTGCG TGGCCCGCTT CGGCTCGGAA CTGAACATCC TGCAGGACGT GCCCGAGGCA
GAGCTTTCCC GGTTCTGGGA ACCGCTGGGC GAAGGCATTG CCCGCATGAG GCGGCGCGAG
GTGCTGCGCC AGTCGGGCTA CGACGGCGAG TACGGCGTGG TGCGCGTGTT CACGGACAAG
GAGCGCGCCT CCATCCAGCG CCGCTCGGTG GTGGGCGGCC TGCCGCTGCT GGAAGGCATG
GGCGTGCCCG CCGCCCCGCG CGCGGACGAC GGAAAAACCG CCCCCCGCGC CACTGGCAAG
GGCAGGAAGG GCAAGGGCGC GGATCGCCCC TCGCTGCTGG ATGGATTGGG CGGCCAGCCT
GATGCTGCTG CCGGGGCTGC CGGGGCTGTC GGGGCTGCCC GATCCGGCCT GTCTGACGCG
GCGGCGCGGC CGGCCCCCGC TGCCGAGCCG GACTTCGAAT TTTCGCCGGA TCCGTCCGCG
CCCGGCCCCT ATGGCGCATC GGGCCTGCCC GACGCTCCAG AAGCCGATGA CGGCCCTCCG
CCGCCCGCCT TTGCCGCGTT CAGCGCGCCC CGCCCGCCGG AAGGCGCCAC CGTGCGCTTC
AACCCCGCCC AGCGTCGCGC CCTGGCCGCC GGTCCGCAGC CGGTGCTGGT GCTGGCCGGT
CCGGGCACGG GCAAGACCCG CACGCTGGTG GGCCGGGTGC TGCATCTGGT GGAAACGGGC
ATCGACGCCC GGCGCATCCT GGCCGTCACC TTCACCCGCC GCGCGGCGGC GGAAATGGAC
GAGCGCCTCG CCACCGCCCT TGGCGAGGAC GCCCCCCTGC CGCGCACCGA CACCCTGCAC
GCCCTGGCCT TCGAATACTG GCACCGGGCC ACGCCCACGC CGCCGGTGCT GCTTTCGGAA
GAGGCGGCCC GCCGCGTGTT CGCGGAAGCC AACCCCGACG AGCCCGCCCA GCGCCTGCGC
GAGGCGTGGG AGGCCATCGG GGTGTGCCGC GAGAAGATGC GTTCGTGCCT TGCGGAGCAC
GCCCCGCTGC TGGCCCGCTA CACCGAGCAG AAGGCGGCCT GGAATCTGGC CGACTACACC
GATCTGCTGG AATTCTGGCT GGATCAGATG CAGAACAACA TCTACGCCAG CCCGTGGCGG
CACGTGCTGG TGGACGAGAT CCAGGACCTT TCGCCCCTGC AGCTGACGCT GGTGCGGGCG
CTGGCCCCGC GCGGCGGGGC GGGCTTTTTC GGCATCGGCG ACCCGGACCA GTCCATCTAC
GGCTTCCGGG GCGCGCACGG CGACGTGGCC GCCTTCCTGC GCGAGGCGTG GCCCGACCTT
TCCGTGGTGG CGCTGGAGGA AAACTACCGT TCCTCGGCGC GCATCCTCGA TTTTGCGGGC
GGGCTGATGC AGGGCCGCTC GGCCTGCGGC CCGCTGCGCG CCGCGCGCGA CATGCCCGGC
GAACTGCACC TGTTCGAGGC GCCCACGGCG GAAGGCGAGG CGGCTTGGAT CGGCGAGCAG
ATTCGCGGCC TCATCGGGGC CACCAGCCAT TCGCTGCTGG ACGCCGGGCA TGGCCGGACG
CGCCGGGGCA CGGTGCTGGA CGAGGGCGGG TTCAGCCCCG GCGACATCGC CGTGCTGGTC
CGCGTCAAAT CGCTGATTCC CCAGTTGCAG CGCACCCTGA CCCGCTTCGG CGTGCCCTGC
GCCGTGCCCG AGGCCGAGGC CTTCTGGGCC GACCAGCGGG TGGCGCTCAT CCTGGGGGCT
GCCGGGCGCA TGCTGGGCAT CGGGTCCACG TCGTCCCCCG CTGGTCCGGC GCTGCCCGCC
GGGCTCAGCC ACCGCCGTCT GGTGGCGGAA GGGGTGCATC CCTCGCTGGC CGACCGGCTG
GGGCTGGATG CGTCGCCGTT CCCCATGCAT CGCGGCGGGG ACGCGGCTGA CAACGCTCAC
GGTGCGCCCG AGGCAGCCGC TGCCACGGGC TCGCCCGCCG TGTCTGGCTC GCCGGATGGT
TCTGATGGCC CCGAGGCATC CGGTGCCGCC ATCGACCCCG CAGGCGGCGA GGCCCCCCTG
CGCCCCGACG CGGAAATTCC CGCGCGCGAC ACGCCGCACG AGGTGGACTG CCCGCCCAAG
GTGCTGGCCC GCGGCCCGCT GGGCGTGGCC GCCTACCTGC GCGAAACCCC GCCCTTCGAC
GACCTTTTCT GGCAGTCCTC GGCCTTCCGG GCGCTGTCCC GCGCCTACGA CACCCACGGC
GGCTGGGCCG GGTTGATGAA CTGGATCAGC CTGCAAAGCG AGCTGGAACT GGTGCGGCGC
GGCAGCGAGA AGGTGCAGAT CATGAGCCTG CACGCGGCCA AGGGGCTGGA GTTCCGCGCG
GTGTTCCTGC CTGCGCTGGA GGACGGCATC ATGCCCTTCG CCGGGGCGGG CACCCTGACC
GGCAAGCCCC AACGCGACGG TGCCAGCCCC GACACCCGTA CCGACATGGA CGAGGAACGC
CGCCTGCTCT ACGTGGGCAT GACCCGCGCC TCCGAGGGGC TGTTCCTCAG CTGCGCCGCG
CGCCGCCAGC TGTATGGCCG AGAATTGCGC CTGAAGCCTT CGCGCTTTCT GGACGACGTG
CCGTTGGAAG GGCTGCGCCG CTCCATGCTG GTGCAGCACC AGAAGCGCAA GGAACGCCAG
CTGTCGCTGA TGTGA
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| Protein sequence | MQQFRADLHI HSRFSRATSG RLNARHLAAW ARVKGLDVLG TGDFTHPRWR AELAEQLVPD
EASGLYRLRD PRGLDAELPE YAGKPLAGRT LFMLQAEISS IYKRGGKVRK VHNLVYVPDM
DAADRLSRRL AEVGNIESDG RPILGLDSRN LLEMVLETHP QAFLVPAHIW TPWFALFGSK
SGFDSVAECF GDLSSEIFAM ETGLSSDPEM NWLWSELDRF ALISNSDAHS GENLGREANL
FSGEIGYESI LRSLKGQGIG GRFLGTLEFF PEEGKYHLDG HRKCGVVMEP RETRARGGLC
PVCGKPVTVG VLHRVVELAD RETPIQSPGQ QGYLSLIPLP EILGELLGVG AKSRKVAEQH
ARCVARFGSE LNILQDVPEA ELSRFWEPLG EGIARMRRRE VLRQSGYDGE YGVVRVFTDK
ERASIQRRSV VGGLPLLEGM GVPAAPRADD GKTAPRATGK GRKGKGADRP SLLDGLGGQP
DAAAGAAGAV GAARSGLSDA AARPAPAAEP DFEFSPDPSA PGPYGASGLP DAPEADDGPP
PPAFAAFSAP RPPEGATVRF NPAQRRALAA GPQPVLVLAG PGTGKTRTLV GRVLHLVETG
IDARRILAVT FTRRAAAEMD ERLATALGED APLPRTDTLH ALAFEYWHRA TPTPPVLLSE
EAARRVFAEA NPDEPAQRLR EAWEAIGVCR EKMRSCLAEH APLLARYTEQ KAAWNLADYT
DLLEFWLDQM QNNIYASPWR HVLVDEIQDL SPLQLTLVRA LAPRGGAGFF GIGDPDQSIY
GFRGAHGDVA AFLREAWPDL SVVALEENYR SSARILDFAG GLMQGRSACG PLRAARDMPG
ELHLFEAPTA EGEAAWIGEQ IRGLIGATSH SLLDAGHGRT RRGTVLDEGG FSPGDIAVLV
RVKSLIPQLQ RTLTRFGVPC AVPEAEAFWA DQRVALILGA AGRMLGIGST SSPAGPALPA
GLSHRRLVAE GVHPSLADRL GLDASPFPMH RGGDAADNAH GAPEAAAATG SPAVSGSPDG
SDGPEASGAA IDPAGGEAPL RPDAEIPARD TPHEVDCPPK VLARGPLGVA AYLRETPPFD
DLFWQSSAFR ALSRAYDTHG GWAGLMNWIS LQSELELVRR GSEKVQIMSL HAAKGLEFRA
VFLPALEDGI MPFAGAGTLT GKPQRDGASP DTRTDMDEER RLLYVGMTRA SEGLFLSCAA
RRQLYGRELR LKPSRFLDDV PLEGLRRSML VQHQKRKERQ LSLM
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