| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1728 |
|---|
| Symbol | |
|---|
| ID | 7173643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2110944 |
|---|
| End bp | 2111777 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643540243 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002436141 |
|---|
| Protein GI | 218886820 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 91 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCAC TTCTTCAGTT CGACGACATG TCGTTCGCGT ATGCGTCCGG CACGACAGGG
GATGGTGCGG CCAAGCCGGG CGCGGGAACC GCTGCTCCGT CGGCTCGGCC CGCCGGGCCA
TCGGTCCGGC CATCCGCCGT CGCGCCTGCC GGTTCCGGCG TGCCCGCGCT CCCCGGCCTT
GCCCACGTGA ACCTTGCGGT GCACCCCGGC GATTTCGTCA TGCTCACAGG GCCGTCGGGC
GCGGGCAAAT CCACCCTGCT GCGGCTTGCC GTGCGGCTGG AAGAGGCCGA CGCCGGGGTG
GTCCGATGTG GTGGCCGACC GGTGGCGGAC ATTCCACCGG CGGAGTTGCG CCGCACCCTG
GGCTTCGTGC AGCAGACCCC CACGGTGGGC GAGGGCACGG TGCGCGACAA CCTGCTGCTG
CCGTTCACCT TTGCGGCCAA CAAGGGGCTG ACCCCGCCCG ACGACGCGGA ACTGGCCGGG
TGGCTGACCC GCTTTCGGCT GGCCGGGGTG GGGCTGGACG CCACGGCGGC GGCGTTGAGC
GTGGGCCAGC GCCAGCGGGT GTGCATCATT CGTACGATGC TGCTGCGGCC CGCCGCCCTG
CTGATGGACG AACCCACCAG CGCGCTGGAC CCGGAAAGCA GCGCGGAGGT GGAAGCCCTG
ACCGAGGAAC TGAACGAGGA CGGGGTGACC GTGCTCATGG TCACCCACGG GGCCTACCGC
CCGGCGCGCC GCCCCTGGCG CGACGTGCGC GTGCAGGACG GCGGGGTGCA CGAAGTGGCG
GTGCCCCATC CCGTTAACGC CGCCGCAGGC ATGATTGCCG GGGGTGCCGC ATGA
|
|---|
| Protein sequence | MQPLLQFDDM SFAYASGTTG DGAAKPGAGT AAPSARPAGP SVRPSAVAPA GSGVPALPGL
AHVNLAVHPG DFVMLTGPSG AGKSTLLRLA VRLEEADAGV VRCGGRPVAD IPPAELRRTL
GFVQQTPTVG EGTVRDNLLL PFTFAANKGL TPPDDAELAG WLTRFRLAGV GLDATAAALS
VGQRQRVCII RTMLLRPAAL LMDEPTSALD PESSAEVEAL TEELNEDGVT VLMVTHGAYR
PARRPWRDVR VQDGGVHEVA VPHPVNAAAG MIAGGAA
|
|---|
| |