Gene DvMF_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1723 
Symbol 
ID7173638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp2108056 
End bp2108556 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID643540239 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_002436137 
Protein GI218886816 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGG TTGCCGTTTT CATGGGCTCT GCCTCGGACG AGGACACCGT ACGCCCGTGC 
ACCGAAGTGC TCGACAGCCT GGGCATTTCC TACCTGTTCA CCGTCAGCTC CGCCCACCGC 
ACCCCGGAAC GTACGGAACA CCTGGTGACC AAGCTGGAAG CCGAAGGCTG CCAAGTGTTC 
ATCTGCGCGG CGGGCATGGC CGCCCACCTG GCCGGGGCCG TGGCCGCGCG CACCCAGAAG 
CCGGTCATCG GCATTCCCGT GGCGGCCTCC GCCCTTGGCG GCATGGACGC CCTGCTGGCC 
ACGGTGCAGA TGCCCCCCGG CTTTCCGGTG GCCACGGTGG CGCTGGACAA GGCAGGCGCG 
CGCAACGCCG CCTGGCTGGC CGCGCAAATC CTGGCTCTGG CCGATCCGGC CCTGTCGCAG 
CGCCTTGCCG CCGCCCGCGC CAAGATGAAG GCCGACGCGG AAAAGGCCGG TGAAGAACTG 
GAAGCACGGT ACCGGAAGTA G
 
Protein sequence
MTKVAVFMGS ASDEDTVRPC TEVLDSLGIS YLFTVSSAHR TPERTEHLVT KLEAEGCQVF 
ICAAGMAAHL AGAVAARTQK PVIGIPVAAS ALGGMDALLA TVQMPPGFPV ATVALDKAGA 
RNAAWLAAQI LALADPALSQ RLAAARAKMK ADAEKAGEEL EARYRK