Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1702 |
Symbol | rpsA |
ID | 7173617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2077042 |
End bp | 2078775 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643540218 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_002436116 |
Protein GI | 218886795 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAA CCCCCGAAAA CATGGAAAAC GCCGCTCTTG AAATGGATCT GAGTTTCGAG AGCGCCCTCG AGAATTACCT CAGCTCCGAT TTCGGCGACC TCGAAGAAGG GTCGATCATC AAGGGCGAGG TGGTTCGCGT GGATGAGGAC AGCGTCCTCG TCGACGTGAA CTTCAAGTCC GAAGGGCAGA TTTCCGCTTC CGAGTTCAGG GACAGCACCG GCAAGGTCAA CATCGCCGTG GGCGACAAGG TGGACGTCTT CGTCGTTCGC AAGAACGAGA TGGAAGGCAC CATCACCCTG TCCTTCGAGA AGGCCAAGCG CATGCAGCTC TTCGACAAGC TCGAAGAGAT TCAGGAAAAC AACGGGGTCA TCACCGGCCG CATCGTGCGT CGCATCAAGG GCGGCTACAC CGTCGATCTC GGCGGCGTCG AAGCCTTCCT GCCCGGTTCG CACGTGGACC TGCGCCCCGT CCCCGACATG GACGCGCTGG TCAACCAGGA ATACGAATTC CGTGTTCTCA AGATCAACCG TCGGCGCAGC AACGTCATCG TTTCCCGCCG CGTCCTGCTT GAAGAGGAAC GCGATTCCAA GCGTCAGGAT CTGCTGCGCA CCCTCGAAGA GGGTCAGATC GTCACCGGCA AGGCCAAGAA CATCACCGAA TACGGCGTGT TCGTGGACCT TGGCGGGCTG GACGGCCTGC TGCACATCAC CGACATGTCC TGGAAGCGCA TCCGTCACCC GAAGGAACTG GTCACCCTTG GCCAGGAACT GCAGCTGAAG GTTCTCTCCT TCGACCGCGA CAACCAGAAG GTGTCGCTGG GCATGAAGCA GCTGGTGGCC GACCCCTGGC AGGACATCAC CGCCAAGTAC CCCGAAGGCG CCAAGCTTCA GGGCCGCGTG ACCAACCTGG TGGACTACGG CGCGTTCGTC GAACTGGAGC CCGGCGTGGA AGGCCTGGTG CACATTTCCG AAATGTCGTG GACCCGCAAG CTGCGCCATC CTTCCCAGAT GGTGCGCGTG GGCGACGAAG TGGAAGTGGT CATCCTCGGC GTCGATCAGG ACAAGAAGCG CATCTCCCTC GGCATGAAGC AGGTCAAGCC GAACCCGTGG GAAGTTGTGG CCGAAAAGTA TCCTGAAGGC ACCATCCTTG AAGGCGTGAT CAAGAACATC ACCGAATTCG GCATGTTCAT CGGCATCGAG GACGGCATCG ACGGCCTGAT CCACGTGTCC GACATCAGCT GGACCAAGAA GATCCGCCAT CCCAACGAAG TGTTCAAGAC CGGCGACGTG GTGCAGGCCA AGGTGCTGAC CGTCGATCAG GAGAACGAAA AGTTCACCCT CGGCATCAAG CAGCTGACCG AAGACCCGTG GACCCATGTG CCCTCGCGCT ACCCGGTTGG CGGGCTGATC GAAGGCACGG TGACCAACAT CACCGACTTC GGCCTGTTCG TTGAAGTGGA AGAAGGCATC GAAGGCCTGG TCCACGTCTC CGAAATCAGC CAGAAGAAGA TCAAGTCTCC CTCCGAGATG TTCAAGGAAG GCGTGGTCAT CCAGGCCAAG GTCATCCACG TCTCCGCCGA AGAACGCCGC CTCGGGCTGT CCATCAAGCA GCTCAAGGAC GAGGAAGAAC GTCGCAAGCC CAAGGAATTC CGCGCCGGTC CCGCCGATAC GGGCGGCCAG AACCTTGGTG ACCTGCTGAA GCAGAAGCTG GAAGAGGATG CTTCCGACAG CTAG
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Protein sequence | MTATPENMEN AALEMDLSFE SALENYLSSD FGDLEEGSII KGEVVRVDED SVLVDVNFKS EGQISASEFR DSTGKVNIAV GDKVDVFVVR KNEMEGTITL SFEKAKRMQL FDKLEEIQEN NGVITGRIVR RIKGGYTVDL GGVEAFLPGS HVDLRPVPDM DALVNQEYEF RVLKINRRRS NVIVSRRVLL EEERDSKRQD LLRTLEEGQI VTGKAKNITE YGVFVDLGGL DGLLHITDMS WKRIRHPKEL VTLGQELQLK VLSFDRDNQK VSLGMKQLVA DPWQDITAKY PEGAKLQGRV TNLVDYGAFV ELEPGVEGLV HISEMSWTRK LRHPSQMVRV GDEVEVVILG VDQDKKRISL GMKQVKPNPW EVVAEKYPEG TILEGVIKNI TEFGMFIGIE DGIDGLIHVS DISWTKKIRH PNEVFKTGDV VQAKVLTVDQ ENEKFTLGIK QLTEDPWTHV PSRYPVGGLI EGTVTNITDF GLFVEVEEGI EGLVHVSEIS QKKIKSPSEM FKEGVVIQAK VIHVSAEERR LGLSIKQLKD EEERRKPKEF RAGPADTGGQ NLGDLLKQKL EEDASDS
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