Gene DvMF_1617 details

Gene Information

• Locus tag: DvMF_1617
• ID: 7173531
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1991877
• End bp: 1992545
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643540134
• Product: flagellar hook capping protein
• Protein accession: YP_002436033
• Protein GI: 218886712
• COG category: [N] Cell motility
• COG ID: [COG1843] Flagellar hook capping protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 110
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCACCA TCTCATCCTT GGCTAGCGCC ACCAGCGCGT CATCGACGTC CAGCGGCGGA 
ACCACGCTGG ATTCCGACGC CTTTCTGCAA CTGCTCATCG CGGAACTGCA GAACCAGGAC 
CCCACCAACC CCACCGACAA CACCGAGATG ATCAACCAGA TCGCCTCGTT CTCAACGGTG 
GAGCAGCTGT CGGCCCTCAA CGACACGGCC ACGTCCATCT ACGACTCGCT GACGGCCATG 
AGCCTGAACT CCGCCGTGAG CTTCATCGGA CAGTCCGTGC TGGCCCAGGG TGACGACATA 
TCCAAGACCG ACGACGCCAC CACCGTGGTC TCCTTCACCC TGGAGTCGGA CGCGCAAACC 
CTTACCGCGC ACGTCTACAA CTCCAGCGGC ACCATCATCA ATTCCGTCTC CCTCGGCGCC 
TCGGACAGCG GCACCTACTC CTTCAGCTGG GACGGCACCA ACTACACCGG CGCCGAAGCG 
GCCAACGGCA CCTACAGCGT GGTGTTCGAA GCCTACGACG AGGACGGCGA CAGCCTGGAG 
GTCTCCACCA TGGTGGCGGG CACGGTTTCC GGCGTCTCCG TGGAAAACGG CACCACGGTG 
CTCACCCTGT CCGACGGCCG CACGGTGAAC CTCGAGGACG TCTACAGCGT CGTCTCCTCC 
GACGCATAA 

 

Protein sequence

MTTISSLASA TSASSTSSGG TTLDSDAFLQ LLIAELQNQD PTNPTDNTEM INQIASFSTV 
EQLSALNDTA TSIYDSLTAM SLNSAVSFIG QSVLAQGDDI SKTDDATTVV SFTLESDAQT 
LTAHVYNSSG TIINSVSLGA SDSGTYSFSW DGTNYTGAEA ANGTYSVVFE AYDEDGDSLE 
VSTMVAGTVS GVSVENGTTV LTLSDGRTVN LEDVYSVVSS DA