Gene DvMF_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1612 
Symbol 
ID7173526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1984422 
End bp1986884 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content68% 
IMG OID643540129 
Productanaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 
Protein accessionYP_002436028 
Protein GI218886707 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones107 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGCCG GGACCGGCCC GCAGGATTGC GCGGCCCGGG GACTGGACCG CCGCACCTTT 
CTCAAGTGGT GCGCGCTGCT GGGCGGCGCG GCCATGCTGC CCGGCGGCCT TGCCGGGCTG
TGCCCCGCCG TGGCCGAGGC CGCCGGCGGC GGAGAGCCGC AGGATTTTGT CTGGAGTTCG
TGCAATGTCA ACTGCGGCAG CCGTTGCGTG CTGCGCGCCA TGGTGCGTGA TGGCGCCATC
GTGCGCATGG ACACCGACAA CCTGGGCTCC GACGACTACG GCACCCACCA GATTCGCGCC
TGCCTGCGTG GCCGGGCCAT GCGCCAGCGG GTGTACGCGC CGGAACGGCT GAAGTACCCC
ATGCTGCGCA CCGGCAAGCG TGGCGAGGCC GCCTTCCGTC GTGCCACGTG GGACGAGGCG
CTGGACGTCA TTGCCGCCAA GATGAAGGAC ATCAAGGAAC GCTACGGCAA CGAGGCGTTC
TATCTCAACT ACGGCACCGG CAACCTGGGT TCGGTCATGT CCAAGTCGTG GCCCACGGAC
CAGACGCCCA TCACCCGGCT GATGAACTGT TACGGCGGCT ACCTGAACCA CTACAACACG
TACAGCACCG CCCAGATCGC CACCAGCATG CCCTACCTGT ACGGCGGCGG GCTTGGCAAC
GCGCTGTCGG ACATCGTCAA CAGCAAGCTG GTGGTGCTGT TCGGCAACAA CCCGGCGGAA
ACGCGCATGA GCGGCGGCGG GGTGGTCTAC GACATCCAGC GCGCCAAGCG TGAAAGCAAC
GTGCGGGTCA TCGTCATCGA CCCGCGCTAC ACCGATACCG CCGTGGCCGT GGCCGACGAG
TGGATTCCCA TCCGCCCGGC CACCGACGCC GCCCTGGCGG CGGGCATTGC CTACGTGCTG
TTTACCGAAG GCATGGCCGA CCGTTCCTTC ATGGATACCT ACTGCGTGGG CCACGACGAG
GCGCACCTGC CCGAGGGCGT GCCCGCGGGC AGCTCGTACG AGGCGTACAT CACGGGCAAG
GGGCCGGACG GCGTGGCCAA GACGCCGGGC TGGGCCTCGG CCATCTGCGG CGTGCCTGTC
GATACCATTG TGCGCCTTGC GCGCGAGATC GGCACCGCCA AGCCCTGCTG CATTAGCCAG
GGCTGGGGGC CGCAGCGCCA CCACAACGGC GAAACCAACT GCCGCGCCAT TGCCGTGCTG
GCCGCGCTGA CCGGCAACGT GGGCATTTCC GGCGGCAACA CCGGCGCGCG GGAGGGCGGC
TATTCCATTC CCTTCCCCGG CTTTCCCACG CTGAAGAACC CGGTGGCCGC CAGCATCTCG
TTCTTCCTGT GGACCGACGC CATCGTGCGC GGCCCGGAAA TGACCGCCGA GCGTGACGGC
GTGCGCGGCG TGCCCAGGCT GAACGTGCCC GTCAAGTTCA TCTGGAACTA CGCGGGCAAC
GCGCTGATCA ACCAGCACTC GGACATCAAC CGCACCGCGC AGATCCTGTC GGACGACACC
AAGTGCGAGA TGATCGTGGT GGTGGAAAAC TTCATGACGC CCAGCGCGCG CTTTGCCGAC
GTGCTGCTGC CCGCCGTGAC CAACCTGGAG GAGAACGACT TCGCCCACCA GGGCAGCACG
GCGGAGATGG GCTACGTGGT CTTTGCCCAG AAGGCCATCG AACCGCTGTT CGAGTCGCGC
AGCGTGTACG ACATGTGCGC CGACATCGCC GAACGCCTTG GCGTGCGCGA ACAGTACACC
GAGGGCCGCA CCCGCGACCA ATGGCTCCAG AAGATCCTGA CCGACGCCCG CCAGAAGCTG
CCCGACCTGC CCGCCACCCT GGAAGAGGCG TGGAAGCTGG GCGTGTACAA GGTCAGGAAT
CCCGGCAAGC CCTTCGTGGC GTACAAGGCC TTCCGCGATG ATCCGGTGGC CAACCCGCTG
GCCACGCCGT CGGGCCGCAT CGAGATATTC TCGAAGCGGC TGTGGGACAT CGGCCACAAG
TGGGAACTGC CCGCCGGTGA GCGCATCACC GCGCTGCCGG AATACGACGA GGCCGCGGAA
GGCCAGGGCG ACCCGCTGCG CAAGAAGTAT CCGCTGCAAC TGGTCACCCA CCACTACAAG
CAGCGCACCC ACTCCACCTA CGGCAACGTG CCGTGGCTGA AGGAAGCGGC CCCCCAGACC
GTGTGGGTGA ACCCGCTGGA CGCCGCCGAC CGGGGCCTGG CCCATGGCGA CATGGTGCGC
GTGTTCAACG ACCGGGGCGC CACGGTGCTG CCCGTAAAGG TGACGCCGCG CATCATGCCC
GGCATCATCT CCATCCCGCA GGGGGCCTGG TACACGCCGG GCGCGGGCGG CACGGACTTC
GGCGGCAGCG CCAACATCCT TACCTCGCTG CGGCCTTCGC CGCTGGCCAA GGGCAACCCG
CAACACACCA CCCTGGTGGA GATGGCCAGA CATTCGGGAG GCAGCCATGC CAATGCCAGC
TAG
 
Protein sequence
MPAGTGPQDC AARGLDRRTF LKWCALLGGA AMLPGGLAGL CPAVAEAAGG GEPQDFVWSS 
CNVNCGSRCV LRAMVRDGAI VRMDTDNLGS DDYGTHQIRA CLRGRAMRQR VYAPERLKYP
MLRTGKRGEA AFRRATWDEA LDVIAAKMKD IKERYGNEAF YLNYGTGNLG SVMSKSWPTD
QTPITRLMNC YGGYLNHYNT YSTAQIATSM PYLYGGGLGN ALSDIVNSKL VVLFGNNPAE
TRMSGGGVVY DIQRAKRESN VRVIVIDPRY TDTAVAVADE WIPIRPATDA ALAAGIAYVL
FTEGMADRSF MDTYCVGHDE AHLPEGVPAG SSYEAYITGK GPDGVAKTPG WASAICGVPV
DTIVRLAREI GTAKPCCISQ GWGPQRHHNG ETNCRAIAVL AALTGNVGIS GGNTGAREGG
YSIPFPGFPT LKNPVAASIS FFLWTDAIVR GPEMTAERDG VRGVPRLNVP VKFIWNYAGN
ALINQHSDIN RTAQILSDDT KCEMIVVVEN FMTPSARFAD VLLPAVTNLE ENDFAHQGST
AEMGYVVFAQ KAIEPLFESR SVYDMCADIA ERLGVREQYT EGRTRDQWLQ KILTDARQKL
PDLPATLEEA WKLGVYKVRN PGKPFVAYKA FRDDPVANPL ATPSGRIEIF SKRLWDIGHK
WELPAGERIT ALPEYDEAAE GQGDPLRKKY PLQLVTHHYK QRTHSTYGNV PWLKEAAPQT
VWVNPLDAAD RGLAHGDMVR VFNDRGATVL PVKVTPRIMP GIISIPQGAW YTPGAGGTDF
GGSANILTSL RPSPLAKGNP QHTTLVEMAR HSGGSHANAS