Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1612 |
Symbol | |
ID | 7173526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1984422 |
End bp | 1986884 |
Gene Length | 2463 bp |
Protein Length | 820 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643540129 |
Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
Protein accession | YP_002436028 |
Protein GI | 218886707 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 107 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGCCG GGACCGGCCC GCAGGATTGC GCGGCCCGGG GACTGGACCG CCGCACCTTT CTCAAGTGGT GCGCGCTGCT GGGCGGCGCG GCCATGCTGC CCGGCGGCCT TGCCGGGCTG TGCCCCGCCG TGGCCGAGGC CGCCGGCGGC GGAGAGCCGC AGGATTTTGT CTGGAGTTCG TGCAATGTCA ACTGCGGCAG CCGTTGCGTG CTGCGCGCCA TGGTGCGTGA TGGCGCCATC GTGCGCATGG ACACCGACAA CCTGGGCTCC GACGACTACG GCACCCACCA GATTCGCGCC TGCCTGCGTG GCCGGGCCAT GCGCCAGCGG GTGTACGCGC CGGAACGGCT GAAGTACCCC ATGCTGCGCA CCGGCAAGCG TGGCGAGGCC GCCTTCCGTC GTGCCACGTG GGACGAGGCG CTGGACGTCA TTGCCGCCAA GATGAAGGAC ATCAAGGAAC GCTACGGCAA CGAGGCGTTC TATCTCAACT ACGGCACCGG CAACCTGGGT TCGGTCATGT CCAAGTCGTG GCCCACGGAC CAGACGCCCA TCACCCGGCT GATGAACTGT TACGGCGGCT ACCTGAACCA CTACAACACG TACAGCACCG CCCAGATCGC CACCAGCATG CCCTACCTGT ACGGCGGCGG GCTTGGCAAC GCGCTGTCGG ACATCGTCAA CAGCAAGCTG GTGGTGCTGT TCGGCAACAA CCCGGCGGAA ACGCGCATGA GCGGCGGCGG GGTGGTCTAC GACATCCAGC GCGCCAAGCG TGAAAGCAAC GTGCGGGTCA TCGTCATCGA CCCGCGCTAC ACCGATACCG CCGTGGCCGT GGCCGACGAG TGGATTCCCA TCCGCCCGGC CACCGACGCC GCCCTGGCGG CGGGCATTGC CTACGTGCTG TTTACCGAAG GCATGGCCGA CCGTTCCTTC ATGGATACCT ACTGCGTGGG CCACGACGAG GCGCACCTGC CCGAGGGCGT GCCCGCGGGC AGCTCGTACG AGGCGTACAT CACGGGCAAG GGGCCGGACG GCGTGGCCAA GACGCCGGGC TGGGCCTCGG CCATCTGCGG CGTGCCTGTC GATACCATTG TGCGCCTTGC GCGCGAGATC GGCACCGCCA AGCCCTGCTG CATTAGCCAG GGCTGGGGGC CGCAGCGCCA CCACAACGGC GAAACCAACT GCCGCGCCAT TGCCGTGCTG GCCGCGCTGA CCGGCAACGT GGGCATTTCC GGCGGCAACA CCGGCGCGCG GGAGGGCGGC TATTCCATTC CCTTCCCCGG CTTTCCCACG CTGAAGAACC CGGTGGCCGC CAGCATCTCG TTCTTCCTGT GGACCGACGC CATCGTGCGC GGCCCGGAAA TGACCGCCGA GCGTGACGGC GTGCGCGGCG TGCCCAGGCT GAACGTGCCC GTCAAGTTCA TCTGGAACTA CGCGGGCAAC GCGCTGATCA ACCAGCACTC GGACATCAAC CGCACCGCGC AGATCCTGTC GGACGACACC AAGTGCGAGA TGATCGTGGT GGTGGAAAAC TTCATGACGC CCAGCGCGCG CTTTGCCGAC GTGCTGCTGC CCGCCGTGAC CAACCTGGAG GAGAACGACT TCGCCCACCA GGGCAGCACG GCGGAGATGG GCTACGTGGT CTTTGCCCAG AAGGCCATCG AACCGCTGTT CGAGTCGCGC AGCGTGTACG ACATGTGCGC CGACATCGCC GAACGCCTTG GCGTGCGCGA ACAGTACACC GAGGGCCGCA CCCGCGACCA ATGGCTCCAG AAGATCCTGA CCGACGCCCG CCAGAAGCTG CCCGACCTGC CCGCCACCCT GGAAGAGGCG TGGAAGCTGG GCGTGTACAA GGTCAGGAAT CCCGGCAAGC CCTTCGTGGC GTACAAGGCC TTCCGCGATG ATCCGGTGGC CAACCCGCTG GCCACGCCGT CGGGCCGCAT CGAGATATTC TCGAAGCGGC TGTGGGACAT CGGCCACAAG TGGGAACTGC CCGCCGGTGA GCGCATCACC GCGCTGCCGG AATACGACGA GGCCGCGGAA GGCCAGGGCG ACCCGCTGCG CAAGAAGTAT CCGCTGCAAC TGGTCACCCA CCACTACAAG CAGCGCACCC ACTCCACCTA CGGCAACGTG CCGTGGCTGA AGGAAGCGGC CCCCCAGACC GTGTGGGTGA ACCCGCTGGA CGCCGCCGAC CGGGGCCTGG CCCATGGCGA CATGGTGCGC GTGTTCAACG ACCGGGGCGC CACGGTGCTG CCCGTAAAGG TGACGCCGCG CATCATGCCC GGCATCATCT CCATCCCGCA GGGGGCCTGG TACACGCCGG GCGCGGGCGG CACGGACTTC GGCGGCAGCG CCAACATCCT TACCTCGCTG CGGCCTTCGC CGCTGGCCAA GGGCAACCCG CAACACACCA CCCTGGTGGA GATGGCCAGA CATTCGGGAG GCAGCCATGC CAATGCCAGC TAG
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Protein sequence | MPAGTGPQDC AARGLDRRTF LKWCALLGGA AMLPGGLAGL CPAVAEAAGG GEPQDFVWSS CNVNCGSRCV LRAMVRDGAI VRMDTDNLGS DDYGTHQIRA CLRGRAMRQR VYAPERLKYP MLRTGKRGEA AFRRATWDEA LDVIAAKMKD IKERYGNEAF YLNYGTGNLG SVMSKSWPTD QTPITRLMNC YGGYLNHYNT YSTAQIATSM PYLYGGGLGN ALSDIVNSKL VVLFGNNPAE TRMSGGGVVY DIQRAKRESN VRVIVIDPRY TDTAVAVADE WIPIRPATDA ALAAGIAYVL FTEGMADRSF MDTYCVGHDE AHLPEGVPAG SSYEAYITGK GPDGVAKTPG WASAICGVPV DTIVRLAREI GTAKPCCISQ GWGPQRHHNG ETNCRAIAVL AALTGNVGIS GGNTGAREGG YSIPFPGFPT LKNPVAASIS FFLWTDAIVR GPEMTAERDG VRGVPRLNVP VKFIWNYAGN ALINQHSDIN RTAQILSDDT KCEMIVVVEN FMTPSARFAD VLLPAVTNLE ENDFAHQGST AEMGYVVFAQ KAIEPLFESR SVYDMCADIA ERLGVREQYT EGRTRDQWLQ KILTDARQKL PDLPATLEEA WKLGVYKVRN PGKPFVAYKA FRDDPVANPL ATPSGRIEIF SKRLWDIGHK WELPAGERIT ALPEYDEAAE GQGDPLRKKY PLQLVTHHYK QRTHSTYGNV PWLKEAAPQT VWVNPLDAAD RGLAHGDMVR VFNDRGATVL PVKVTPRIMP GIISIPQGAW YTPGAGGTDF GGSANILTSL RPSPLAKGNP QHTTLVEMAR HSGGSHANAS
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