Gene DvMF_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1580 
Symbol 
ID7173494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1948892 
End bp1950076 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content63% 
IMG OID643540097 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002435996 
Protein GI218886675 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACA TCCTGCTGGC CCTGTGTCTT TCCCTGTGCC TCGTCCTGCC TGCCACGGCC 
CTTGCGGCGG ACCTTTCCCT CAGCGTGCCG CTGCCGCTTA CCGGCGGCCA GGCCAAGTTT
GGCGAGATCA TCAAGAAATC CATGGAGATC GCCGCCGAGG AAATCAACGC CAAGGGCGGA
GTGAAGGGCG GCAAGCTGGT GCTGCGCTTC GAGGATTCGC AAGGCAAGCC CGAGATCGCC
CGGTCCATCG CCGAAAAGAT CATCGACGTG CAGAAGCAGC CGCTGCTGTT CGGCGAATAC
ACCTCGGCCT GCGCCAAGGC CGTGGCCGCC GTGGCCGAAG AACGCAAGAC CCCCTACGTG
GTGGTGGCCT CCGCCGCCGA CGAGATAACC CAGCAGAACT ACAAGTACGT CTACCGCATC
AACCCCACCA ACGCCTATTA CGCGTCCGGC CTGCTTTCGT TCATGGACAA GGTGGTCAAG
CCCAAGACCA TGGTCATCCT GTACGAATCG TCCGACTTCG GCACCTCGGG CGCGGAAGAG
ATGGCCAAGT CCGCCGAAAA GGCGGGCATC AAGGTGCTGA TGAAGGAAAA GTACGAAAAG
GGCGCGGTGG ACTTCAAGCC CGTGCTCTCG CAGGTCAAGG CGCAGAACCC CGACGTCATC
TACATGGTTT CCTACGTCAT GGACGCGGCC CTCCTGATGC GCCAGATCAA GGAACTGCGC
ATCGACGCGC GCCTGTTCGC GGGTGGCGCC GCCGGGTTCG CCATCCCCGA ATTCATCGAC
AACGCCAAGG ACGCCGCCGA GTTCGTGGTT ACCGCCACCC TGTGGAGCCC GCAGGTAAGC
TACCCCGGCG CGCGCGAATT CGCCGAAAAG TACAAGGCTG CCCATGGCGA TTACCCCTCG
TACCACGGCG CGCTGGCCTA TTCTTCGGTT TACGTGGTCA AGGACGCCGT GGAGCGCGCC
AAGGCCCTGA CCACCGAAGA CATCAACGCC GCCATGAAGG GCGTGGACAT GATGACCGCC
TTCGGCCCGG TGAAGTTCGA AAGCCGCGAC GGCTACCAGA ACCAGAACTT CATCGACACG
CTGGCCTTGC AGGTGCTGCA GGGCAAGCAC GAGACCATCT GGCCCGAACG CTACGCCAGC
GCCAAGCCGG TGTTCCCCCT CCCCAAGTGG CGCGAACGCA AGTAG
 
Protein sequence
MRNILLALCL SLCLVLPATA LAADLSLSVP LPLTGGQAKF GEIIKKSMEI AAEEINAKGG 
VKGGKLVLRF EDSQGKPEIA RSIAEKIIDV QKQPLLFGEY TSACAKAVAA VAEERKTPYV
VVASAADEIT QQNYKYVYRI NPTNAYYASG LLSFMDKVVK PKTMVILYES SDFGTSGAEE
MAKSAEKAGI KVLMKEKYEK GAVDFKPVLS QVKAQNPDVI YMVSYVMDAA LLMRQIKELR
IDARLFAGGA AGFAIPEFID NAKDAAEFVV TATLWSPQVS YPGAREFAEK YKAAHGDYPS
YHGALAYSSV YVVKDAVERA KALTTEDINA AMKGVDMMTA FGPVKFESRD GYQNQNFIDT
LALQVLQGKH ETIWPERYAS AKPVFPLPKW RERK