Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1580 |
Symbol | |
ID | 7173494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1948892 |
End bp | 1950076 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643540097 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002435996 |
Protein GI | 218886675 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 96 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACA TCCTGCTGGC CCTGTGTCTT TCCCTGTGCC TCGTCCTGCC TGCCACGGCC CTTGCGGCGG ACCTTTCCCT CAGCGTGCCG CTGCCGCTTA CCGGCGGCCA GGCCAAGTTT GGCGAGATCA TCAAGAAATC CATGGAGATC GCCGCCGAGG AAATCAACGC CAAGGGCGGA GTGAAGGGCG GCAAGCTGGT GCTGCGCTTC GAGGATTCGC AAGGCAAGCC CGAGATCGCC CGGTCCATCG CCGAAAAGAT CATCGACGTG CAGAAGCAGC CGCTGCTGTT CGGCGAATAC ACCTCGGCCT GCGCCAAGGC CGTGGCCGCC GTGGCCGAAG AACGCAAGAC CCCCTACGTG GTGGTGGCCT CCGCCGCCGA CGAGATAACC CAGCAGAACT ACAAGTACGT CTACCGCATC AACCCCACCA ACGCCTATTA CGCGTCCGGC CTGCTTTCGT TCATGGACAA GGTGGTCAAG CCCAAGACCA TGGTCATCCT GTACGAATCG TCCGACTTCG GCACCTCGGG CGCGGAAGAG ATGGCCAAGT CCGCCGAAAA GGCGGGCATC AAGGTGCTGA TGAAGGAAAA GTACGAAAAG GGCGCGGTGG ACTTCAAGCC CGTGCTCTCG CAGGTCAAGG CGCAGAACCC CGACGTCATC TACATGGTTT CCTACGTCAT GGACGCGGCC CTCCTGATGC GCCAGATCAA GGAACTGCGC ATCGACGCGC GCCTGTTCGC GGGTGGCGCC GCCGGGTTCG CCATCCCCGA ATTCATCGAC AACGCCAAGG ACGCCGCCGA GTTCGTGGTT ACCGCCACCC TGTGGAGCCC GCAGGTAAGC TACCCCGGCG CGCGCGAATT CGCCGAAAAG TACAAGGCTG CCCATGGCGA TTACCCCTCG TACCACGGCG CGCTGGCCTA TTCTTCGGTT TACGTGGTCA AGGACGCCGT GGAGCGCGCC AAGGCCCTGA CCACCGAAGA CATCAACGCC GCCATGAAGG GCGTGGACAT GATGACCGCC TTCGGCCCGG TGAAGTTCGA AAGCCGCGAC GGCTACCAGA ACCAGAACTT CATCGACACG CTGGCCTTGC AGGTGCTGCA GGGCAAGCAC GAGACCATCT GGCCCGAACG CTACGCCAGC GCCAAGCCGG TGTTCCCCCT CCCCAAGTGG CGCGAACGCA AGTAG
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Protein sequence | MRNILLALCL SLCLVLPATA LAADLSLSVP LPLTGGQAKF GEIIKKSMEI AAEEINAKGG VKGGKLVLRF EDSQGKPEIA RSIAEKIIDV QKQPLLFGEY TSACAKAVAA VAEERKTPYV VVASAADEIT QQNYKYVYRI NPTNAYYASG LLSFMDKVVK PKTMVILYES SDFGTSGAEE MAKSAEKAGI KVLMKEKYEK GAVDFKPVLS QVKAQNPDVI YMVSYVMDAA LLMRQIKELR IDARLFAGGA AGFAIPEFID NAKDAAEFVV TATLWSPQVS YPGAREFAEK YKAAHGDYPS YHGALAYSSV YVVKDAVERA KALTTEDINA AMKGVDMMTA FGPVKFESRD GYQNQNFIDT LALQVLQGKH ETIWPERYAS AKPVFPLPKW RERK
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