Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1567 |
Symbol | |
ID | 7173478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1933443 |
End bp | 1934867 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643540081 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_002435983 |
Protein GI | 218886662 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCACA CGTCCGATCG CAGCCTGCCT CCGACTTCCG ATTCCGCCCC CCGCTTCGTG CTCACCGACG CCCACCGCGC CGCCATCGTG GCTGCCGTGG GCGAAGCCGC CGTGCTGCAC TCTCCCGGTG AACCCTATGA CCGCGACGCC TCGGAGCTGC GCGCCCCCGC CGACCTGGTG GTGCTGCCGG AAACCGTGGA ACAGGTGCAG GCGCTGCTGC GCTGCGCCAG CGCCCATGCC ATTCCGGTCA TTCCGCGCGG CGGCGGCACC GGCCTTGCGG GCGGCTGCCT TGCCGTGCGC GGCGGGGTGG TGCTGTCGCT GGAGCGCATG AACCGCATCC GCGCCATCGA CACCCGCAAC CTGGTGGCCG AGGTGGAGGC GGGCGTCATC TCGCAGCGCG TGCGCGATGC CGCCGCCGAA CAGGGCCTGT ACTACCCGCC CGATCCGGCG GGCATGGACC GTTCCACCAT CGGCGGCAAC GTTGCCACCA ACGCGGGCGG CCCCGCATGC GTCAAGTACG GCGTCACCCG CGACTACGTG CTGGGCGTGG AGGCCGTGCT GCCCGACGGC GAACTGCTGC GCGCCGGGGT GCGCACCCGC AAGGGCGTGG TGGGCTACGA CATGGCCCAC CTGCTGTGCG GGTCGGAAGG CACGCTGGGC GTCATCACCG CCCTTACCCT GAAGCTGGTG CCCCTGCCGC CCGCCACCGT GAGCATGGCC GTGGCCTTTC CGGACATGGC CGCCGCCATG CGCGGGGTGG CCGCCGTGCT GGGGGGCGGC CACCTGCCTT CGGCCATCGA ATTCCTGGAC CATCGCTGCA TCCGTCTGCT GGGTGAACTG CTGCCCATTC CCGTGCCCGG CGACAAGCCC TCGCTGCTGA TCATCGAACT GGACGGCGCC CGCGAGCAGA TCGTGCCCGA ACTTGACCTT GTGGCCGCCA TCTGCCGTCA GCAGGGGGCC ACCCACGTGC TGCCCGCCGC CGACGAGGAA ACCCGCGTCC GCGTCTGGGG CGCGCGCCGC CAGGTGTCGC TGCGCATCCA CGACTACGCC GCCCTGTACA TGTCCGAGGA CGTTGCCGTG CCCCTTGGGG CCATCGCCGA ACTGGTGGCC GCGCTGCCGG AGTTCGAGCA ACGCTACGGC ATGGAGATCT TTGCCTTCGG CCATGCGGGC GACGGCAACA TCCACCTCAA TGTCACCGCA CCCACCCGCG ACACCCGCGA CGTGGTGGAG CAGGGCATCG TGGAGCTGGT GGGCAAGGTG CTGGAACTTG GCGGGACCAT CTCCGGCGAG CACGGCATCG GCGAGGCCAA GAAGCACCTG CTGCCGCTGG AACTCTCCCC CGCCTCCATT CGGTTGCAGC GGGGCATCCG CCAGGTGTTC GACCCCAGGG GCATCATGAA CCCTGGCAAG GTGTTCGGAC AATAG
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Protein sequence | MPHTSDRSLP PTSDSAPRFV LTDAHRAAIV AAVGEAAVLH SPGEPYDRDA SELRAPADLV VLPETVEQVQ ALLRCASAHA IPVIPRGGGT GLAGGCLAVR GGVVLSLERM NRIRAIDTRN LVAEVEAGVI SQRVRDAAAE QGLYYPPDPA GMDRSTIGGN VATNAGGPAC VKYGVTRDYV LGVEAVLPDG ELLRAGVRTR KGVVGYDMAH LLCGSEGTLG VITALTLKLV PLPPATVSMA VAFPDMAAAM RGVAAVLGGG HLPSAIEFLD HRCIRLLGEL LPIPVPGDKP SLLIIELDGA REQIVPELDL VAAICRQQGA THVLPAADEE TRVRVWGARR QVSLRIHDYA ALYMSEDVAV PLGAIAELVA ALPEFEQRYG MEIFAFGHAG DGNIHLNVTA PTRDTRDVVE QGIVELVGKV LELGGTISGE HGIGEAKKHL LPLELSPASI RLQRGIRQVF DPRGIMNPGK VFGQ
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