| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1494 |
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| Symbol | |
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| ID | 7173405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1836270 |
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| End bp | 1837622 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643540008 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_002435910 |
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| Protein GI | 218886589 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 102 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAA GGAAATCGCA AAAACGGCGC TGGCTCGCGT TCTGCGCGCT GGCCGCCGTA
CTGGGGCTTG CGAGCGGGGT TCCGGCGCAG GCGCAGGAAG TGACGCTGAA AGACTCGGTC
GTCAACACCC TTGAAACGCA TCCTCGCCTC AAGGCCTTCC AGGAAAACCG CCAGGCCGCC
GAACACGACG TTGACCGCGC GCGTGCCGGC TGGTTTCCCC GCCTTGATGT GCGTGGCGGC
GTGGGCGTGG AACAGTACAA CGACCGCTCC ACCCGCGCCA CCGGCAACGA AAACGACTGG
TATGACCGCA GCGAAGGCTC GCTGACGCTC AGCCAGACCA TCTGGGACGG CCTTGCCACC
GCCAGCCGCG TGGACATCAA CAAGAACAAG CTCGGCTCGG TGGACAACCG CCTCATCGAC
AATGCTGAAG CCCTTGGCCT GGACGCCGTG CTCGCGCACA TCGAAGTGCT GCGCCAGCGC
GAAATCGTCC GTCTGTCCGA GATCAACGTG CAGCAGCACG AATCCATCCT GGGTTCGCAG
CAGGAACGTT CGCGCATGGG CGCGGCCAGC GTTTCCGATG TGACCCAGAC CCAGGGCCGT
TTGGCCCGCG CCCAGTCGAC CCTGACTGAA TCGCGTTCCG CCTTGCAGGT GGCCGAAGCC
GCCTACCTGC GCCTGACCGG CAAGATCGTG CCCGAAACCC TGGGCCCGGC GGAAGTGCCC
ACGGCCACCC CGCCCAGCGC CGACGCCGCC CTGGCCGACA GCCAGTCCAG CAACCCCAAG
GTGCAGGCGT TGATCTCCGA CGTTCGCACC TCGGAAGCGG AAATCGACCT TGCCAAGTCC
GGCTACCACC CCGTGATCTA TGCGGAAGTG GGCCCCACCT ACAAGGACCA GGTGGAAAGC
AGCCGTGACC ACGAATGGGG CACCGCCGCC ATGCTGCGCA TGAGCTGGAA CCTGTTCAAC
GGCGGCGCCG ACATGGCCGC GGTGAAGGGC GCGTCCGCCC GTTCGCGCCA GAGCCGTCAG
GAACTGCAGA ACCAGATCGA CGAACTGGGC CGCGAAACCC GCGCCACCTG GACCCAGATG
CTGTCCGCCC GTGAACAGCA GCGCTACTTC CTGTCTGCCA TCGACTACAA CGTGCAGACC
CGCGACGCGT ACATGCAGCA GTTCCTGGTG GGCCAGCGCA GCCTGCTGGA CGTGCTGGAC
GCCGAAAACG AACTGTACAG CTCGTCCATT CAGGAAGTTA CCTCGCGCAT GAACGATGCC
GGCGCCCAGT ACCGCCTGCT GGCCCTTGGC GGCAAGCTGC TGGAAAGCCT GGGCATCGAC
CGCGACGCCC TGCGCAAGAA CACCGAGCAA TAG
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| Protein sequence | MKERKSQKRR WLAFCALAAV LGLASGVPAQ AQEVTLKDSV VNTLETHPRL KAFQENRQAA
EHDVDRARAG WFPRLDVRGG VGVEQYNDRS TRATGNENDW YDRSEGSLTL SQTIWDGLAT
ASRVDINKNK LGSVDNRLID NAEALGLDAV LAHIEVLRQR EIVRLSEINV QQHESILGSQ
QERSRMGAAS VSDVTQTQGR LARAQSTLTE SRSALQVAEA AYLRLTGKIV PETLGPAEVP
TATPPSADAA LADSQSSNPK VQALISDVRT SEAEIDLAKS GYHPVIYAEV GPTYKDQVES
SRDHEWGTAA MLRMSWNLFN GGADMAAVKG ASARSRQSRQ ELQNQIDELG RETRATWTQM
LSAREQQRYF LSAIDYNVQT RDAYMQQFLV GQRSLLDVLD AENELYSSSI QEVTSRMNDA
GAQYRLLALG GKLLESLGID RDALRKNTEQ
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