Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1473 |
Symbol | |
ID | 7173382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1804298 |
End bp | 1806412 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643539985 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_002435889 |
Protein GI | 218886568 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 0.935092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAAC ATATTCGCAA GCGCGACGGC CGCGTGGAAA CCTGGTCCGT GGACCGGGTA GGCCACGCCA TCAACAAGGC CCTGAAAGCC AGCGGCATCA AGGATCCCCT GCTGGGCAAG CGTCTGGCGC AGCGGGTGGA AGCCAAGCTC GACGGCGTGG ACATGCCCGA GCAGGAGCAG GTGCAGGACC TTGTCCAGCG CGTGCTGATG GAAGCCCGCC TGTACGCCGT GGCCGAGCGG TACATCATCT ACCGTGAAAA GCGCCGCGAG ATGCGCAGCC AGAACGAGGC CTATCTTGAC GTGGCCCGGA TGATCGAAAG CTACCTCGAC AGGTCCGACT GGCGCGTCAA CGAAAACTCC AACATGGGGC ATTCGTTCCA GGGGCTCATC CTGCACATGG CGGGTTCGGT CCAGGCGCGC TACGTGCTGG AAAAGTACCC CGAGGAAATC CGCCTGGCCC ATACCCACGG CTATTTCCAC ATCCACGACC TGTCCTTCGG CCTGGCCGGG TACTGCGCGG GCTGGAGCCT GCGCGACCTG TTGCTGGAAG GCTTCAACCT GAAGGGCCGC TGCTGCGCGT CCCCGGCGCG CCACTTCGAC GCGGCCTGCG GGCAGATCGT CAACTTTCTT GGTACGCTGC AAAACGAGTG GGCGGGCGCG CAGGCGTTCA ACAACATCGA CACCTATCTT GCCCCGTTCA TCCGACACGA CAAGCTGACC TACGACGAGG TCAAGCAGGG CGTGCAGAAG CTGGTGTACA ATCTGAACAC CACCTCGCGC TGGGGCGGGC AGAGCCCGTT CACCAACTTT ACCCTGGACA TGGCCCCGCC CAGGCACATC GCCAATGAAC CGGTGATCAT CGGCGGGCAG TTCCAGGATT CCACCTACGG CGACTACGCC GCAGAGATGG ACATGTTCAA CCGGGCGTTC ATAGAGGTGA TGCTGGAAGG CGATGCCGAC GGGCGCATCT TCTCCTTCCC CATCCCCACC TACAACGTCA CCCCCGACTT TCCGTGGGAT ACAGACACCG GCAAGCTGCT GCTGCGCATG ACGGCCAAGT ACGGCGCGCC CTATTTCCAG AACTTCATCA ACTCGGACCT CAACCCCGAG GACGTGCGTT CCATGTGCTG CCGCCTGCAG ATGGACCTGC GCGAAATCCG CAAGCGCACC GGCGGCCTGT TCGGCTCGGG CGACCTGACC GGCTCCATCG GCGTGGTCAC CCTGAACCTG CCCAAGTTCG CGTACCTGGC CCAGGGCGAG GAAGACTTCC TCGACATGAT CACCGAGTAC GCGGAAATGG CCCGCGACGC CCTGGAATAC AAGCGCAAGC TGTGCACCCA GATGCTGGAC GCGGGCATGT TCCCGTTCTC GCGCCGCTAC CTCAAGAACG GCTACGCGGG CCACTTCTCC ACCATCGGGC TCATCGGCGG GCACGAGGCC TGCCTGAACC TCCTGGGCAA GGGCATCGAG ACCGAGGCCG GGCTGCGCCT GATGAAGCGC GTGCTGCACC ACCTGCGCGA GCTGACCGTG CGCTTCCAGG AAGAAACCGG GCACATGTAC AACCTTGAAG CCACGCCCGG CGAAGGCACC TGCTACCGCC TTGCGCGCAT CGACCGCGCC CTGTACGAAG ACATTGCGAC TTCGGGCGGC GACACGCCGT ACTACACCAA CTCCACCCTG CTGCCCGTGG GCTTCACCGA AGACGTGTTC GCCGCGCTGG AGCACCAGAA CGAGTTGCAG ACCCTGTACA ACGGCGGCAC GGTGTTCCAC TCCTTCCTTG GCGAGGCCGC GCCCGACGAG GCCTCGGTAA AGAACTACCT GCTGAAGGCC ATGCAGAAGA CGCGTATTCC GTACATCTCG GTCACGCCCA CCTTCTCGGT GTGCCAGAGC CACGGTTACC TGCGCGGCGA GCACATGAAC TGCCCGGAAT GCGGCGAAGA GGCGGAAGTG TACACCCGCG TGGTGGGCTA CTACCGCCCG GTCAGCCGCT GGAACCTTGG CAAGCAGCAG GAATACAAGG AACGCGTGGA GTACGGCATG GGATCGTTCT GCGACTGCGG CGCGCCTGCC ACCGAAGTGG ACATGAAGCT GCCGGAACCT GCCGTAGCCG ACTAG
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Protein sequence | MPQHIRKRDG RVETWSVDRV GHAINKALKA SGIKDPLLGK RLAQRVEAKL DGVDMPEQEQ VQDLVQRVLM EARLYAVAER YIIYREKRRE MRSQNEAYLD VARMIESYLD RSDWRVNENS NMGHSFQGLI LHMAGSVQAR YVLEKYPEEI RLAHTHGYFH IHDLSFGLAG YCAGWSLRDL LLEGFNLKGR CCASPARHFD AACGQIVNFL GTLQNEWAGA QAFNNIDTYL APFIRHDKLT YDEVKQGVQK LVYNLNTTSR WGGQSPFTNF TLDMAPPRHI ANEPVIIGGQ FQDSTYGDYA AEMDMFNRAF IEVMLEGDAD GRIFSFPIPT YNVTPDFPWD TDTGKLLLRM TAKYGAPYFQ NFINSDLNPE DVRSMCCRLQ MDLREIRKRT GGLFGSGDLT GSIGVVTLNL PKFAYLAQGE EDFLDMITEY AEMARDALEY KRKLCTQMLD AGMFPFSRRY LKNGYAGHFS TIGLIGGHEA CLNLLGKGIE TEAGLRLMKR VLHHLRELTV RFQEETGHMY NLEATPGEGT CYRLARIDRA LYEDIATSGG DTPYYTNSTL LPVGFTEDVF AALEHQNELQ TLYNGGTVFH SFLGEAAPDE ASVKNYLLKA MQKTRIPYIS VTPTFSVCQS HGYLRGEHMN CPECGEEAEV YTRVVGYYRP VSRWNLGKQQ EYKERVEYGM GSFCDCGAPA TEVDMKLPEP AVAD
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