Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1458 |
Symbol | |
ID | 7173367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1785575 |
End bp | 1788112 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643539970 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002435874 |
Protein GI | 218886553 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 0.468501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCC ACACCGTAAC GCCCGACCAG CCCTCCGGCC GCCCGCCAGA CGGGCAGCCG AACGGTCAGC CGAACGGACA CAGTCCCGGC GGCGCCCCGG TCTCGCCTGA TCCGCCTGAT CCTCGTGATC CGCGTGAACC GCACGATCCG CACAACGCCC CGGACTTTCC GCGCGTCATC CGGGTGAACC CGGCAGATTC GCGTGAACGC AAGCGCCGCC AGCGCGAAAT CTACGGGGCG GCGGGCGTGC TGCTGGCCAT GCTGGTGGCC ACCTGGATCG AACTGAACCT GTTCGGCGTG GATTCCTATA TCTTTCTGGT TTTGCTGAAC ATCAACTTCA TCCTGTTGCT GGTGGTGCTG TTCATCGTGC TGCGCAACGG GGTGAAACTG ATCCTCGAAC GACGCCGCCG GGTGTTCGGA TCGCACCTGC GCACCCGGCT GGTGCTGGCC TTCATGGCGC TGTCGCTGGT GCCCACGGTG ATCATGTTCC TTGCCTCCAA CCGGGTGGTG GGCACTTCGG TGGACTACTG GTTCAACAAC CAGGTGGAAA TCTCGCTGGA CAGCGCCCTG GACGTGGGGC GCAGCTTCTA TACCGCCTCC GCCGACCGGC TGCGCGCGCG CAGCGAATCC ATCGTGGCGG AAATAACCGA CCGCCATCTG ACATGGGGCG GCCCGGCCAT GGATGCCCTG CTGGAACGCA AGCGCAAGGA ATACGGCCTG TCGCTTGCCG GGGTCGTCAC CCCCGGCCAG GTGGAACAGA ACTGGCACGC CCCGCCAGAC CTCACCCCCA CCTGGAAGGA GGCCCGGCGC AGGATCGCCT GGGACCAGGC GGCGGCGCAA CGCTACGTGT CGCTGCTGTG GAAGGGCGAA CACGCCGACT ATGTCTTCGG CGTGCTGGCC GTGGACGCGG GGCGCACCGG CTATCTGGTG GTGGGGGAAT CCATCGGCGA AGGGGTGATG CTGAAGCTGG AGCGCATCGC CCAGGGCTTC GACGACTACA AGAAGCTGAA AACGCTGAAA CGCCCGCTGA AGGTTTCGTT CCTGTTCATC CTTGCGGTGC TCAGCGTGCT GATCATCCTG GGGGCCATCT GGTTCGGCTT CCGGCTGTCC AAGGAACTCA CCGCCCCCAT CCTGGCCCTG GCCGAAGGGA CGGAGCGCAT CGCCCGGGGC GACCTGTCCT TCCGGCTGGA AGACGCGTCC ACCGACGAAC TGGGGCTGCT GGTGCGCTCG TTCAACCGCA TGGCCGAAGA CCTGTCCGTC AGCCGCACTC GGCTCACCGA CGTCAACGAA ATGCTGGCCC TGCAGAACGT GGAGATCGGC GAGCGCAGCC GGTACATCGC CACCGTGCTC GACAACATCG CGGCGGGGGT GGTCTCTTTC GGGCCGGACG ACCGGGTGGC CACCATCAAC GCCGCCGCCT GCGCCATGTT CGGGGTGGAG CCGGGCTCCA TCGTGGGCCG CGACCCGCGC GAATTCCTTT CCGCCGAAGA CGCGTCCATG AACCGCGAAA TGCTGGACGA GGTACGCGCC CGGCCCGGTC GCCGCTGGCA ACGACAGGTG GAATACGGCA AGGGCGACCG CGCCCTGAAG CTGCTGCTCA CCTCCGTCAG CCTCACCACG CCCGAAGGCG AGTACCGGGG CGCGGTGGCC GTGTTCGAGG ACATCACCGA GCTTGAGCGC ATGCAGCGCA TGGCCGCCTG GCGCGAGGTG GCGCGACGCA TCGCCCACGA GATCAAGAAC CCGCTCACCC CCATCAAGCT TTCGGCCCAG CGGCTGGAAC GCAAGTTCGC CGGTGCCGTG GGCGACCCCG TGTTCGGCCA GTGCACCGAC CTCATCGTGC GCCAGGTGGA ACACCTGCAA CAGATGGTGG AAGAATTCTC CGCCTTCGCC AAGCTGCCGG AAGTAACCCC CCGGCCCGGC AATCTCACCC CGCTACTGGA GGAACTGACC GCCCTGTTCC GCAACAGCCA CAGCAACATC GCGTGGACGC TGGACATTCC CGCGCCGCTG CCGGTGCTGC CCATGGACCA GGAAGCGCTG CACCGGGCCT TCCTGAACAT CCTGACCAAC GCGGCGGAAG TGCTGCAAGG CCGCACCGAC GGCGCGGTGA CCATCACCGC CGTGCACAAC ACGGCCCTGA ACCTGGTGCG GGTGGACGTG GCCGACAACG GCCCCGGCCT GACGCCGGAA GAACGATCGC GCCTGTTCGA ACCCTACTTT TCGCGCAAGA AGGGCGGCAC GGGCCTTGGG CTGACCATCG TGAAGTCCGT GGTGTCGGAC CACCGCGGCT ACGTGCGCGC CCATGCCGTC CCGCGCACGC CCGATGCACT TGTCGCGCCC GAAGCACTTG TCGCGCCAGA CGCGCCAGAT GCACAGGTCG CACTGGTCGC GCCGATCACG CCGGTCACGC CAGCCGGGCC AGACAGGCCG CACGGGCCAG CCGGGCCAGA CGGGCCGCAC ACGCAGCGCC CCACCCGCAC TCCCGGCCTC ACCGCCCCCA CAGGCACCGT TGTCACCGTC GAGCTTCCTG TGGCATAA
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Protein sequence | MARHTVTPDQ PSGRPPDGQP NGQPNGHSPG GAPVSPDPPD PRDPREPHDP HNAPDFPRVI RVNPADSRER KRRQREIYGA AGVLLAMLVA TWIELNLFGV DSYIFLVLLN INFILLLVVL FIVLRNGVKL ILERRRRVFG SHLRTRLVLA FMALSLVPTV IMFLASNRVV GTSVDYWFNN QVEISLDSAL DVGRSFYTAS ADRLRARSES IVAEITDRHL TWGGPAMDAL LERKRKEYGL SLAGVVTPGQ VEQNWHAPPD LTPTWKEARR RIAWDQAAAQ RYVSLLWKGE HADYVFGVLA VDAGRTGYLV VGESIGEGVM LKLERIAQGF DDYKKLKTLK RPLKVSFLFI LAVLSVLIIL GAIWFGFRLS KELTAPILAL AEGTERIARG DLSFRLEDAS TDELGLLVRS FNRMAEDLSV SRTRLTDVNE MLALQNVEIG ERSRYIATVL DNIAAGVVSF GPDDRVATIN AAACAMFGVE PGSIVGRDPR EFLSAEDASM NREMLDEVRA RPGRRWQRQV EYGKGDRALK LLLTSVSLTT PEGEYRGAVA VFEDITELER MQRMAAWREV ARRIAHEIKN PLTPIKLSAQ RLERKFAGAV GDPVFGQCTD LIVRQVEHLQ QMVEEFSAFA KLPEVTPRPG NLTPLLEELT ALFRNSHSNI AWTLDIPAPL PVLPMDQEAL HRAFLNILTN AAEVLQGRTD GAVTITAVHN TALNLVRVDV ADNGPGLTPE ERSRLFEPYF SRKKGGTGLG LTIVKSVVSD HRGYVRAHAV PRTPDALVAP EALVAPDAPD AQVALVAPIT PVTPAGPDRP HGPAGPDGPH TQRPTRTPGL TAPTGTVVTV ELPVA
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