Gene DvMF_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1441 
Symbol 
ID7173345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1762881 
End bp1763711 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content71% 
IMG OID643539948 
Producthemolysin A 
Protein accessionYP_002435857 
Protein GI218886536 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCGC GCCCGCGACC GGCGAAACCC CCGAAAAAGG AGCGCGCCGA CCAACTGGTG 
TTCGAGGCCG GGCTGGCCGA AAGCCGCGAG CAGGCCAAGC GGCTGATCAT GGCCGGGCAG
GTGGTGGTGC TGCCGGAGGG AGACGGCGAC GCGGACGGGG ACGACGCGGG GGGGCCGGAT
CTGGCGAAGA CGCCCGAACG GGCCGTGAAG GTGGACAAGC CGGGCCACAA GTACCCGGCC
ACGACGCGCT TCGAACTGTT CGGGCGCGAG CGCTTCGTCT CGCGCGGGGC CTACAAGCTG
CTGACCGCCA TCGAGTATTT CGGGCTGGAC GTGACCGGGT TCGTCTGTCT GGACGCCGGG
GCGTCCACAG GGGGCTTCAC CGATTGCCTG CTCCAGCACG GGGCGGCACG GGTATATTCC
GTGGACGTGG GGCACAACCA GCTGCACGAG CGGCTGCGGG CCGACGCGCG GGTTGTCTCG
CACGAGCACA CCAACCTGCG CACCGCGCCG CCGGAGCTGA TTCCCGAGCC GGTGGACCTG
GTGGTGGCGG ATGTGTCGTT CATCTCGCTG ACGCTGGTGC TGGCGCCGTG TCTGCAATGG
CTGAAACCGG GGGGGCGGGT GGTGGCGCTG GTGAAGCCGC AGTTCGAGGT GGGGCCGGGG
CAGACCGAGA AGGGCGTGGT GCGCGACCCG GCCCTGCGGC AGGCTGCCGT GGACAAGGTG
GTGGCGTACT GCCGCGATGC GCTGGGGCTG GACCTGGAGG GCGTGGTGCC CTCGGCCATT
ACCGGCCCCA AGGGCAATCA GGAGTATCTG GCGGCGTTCC GGCGGCGGTA G
 
Protein sequence
MAPRPRPAKP PKKERADQLV FEAGLAESRE QAKRLIMAGQ VVVLPEGDGD ADGDDAGGPD 
LAKTPERAVK VDKPGHKYPA TTRFELFGRE RFVSRGAYKL LTAIEYFGLD VTGFVCLDAG
ASTGGFTDCL LQHGAARVYS VDVGHNQLHE RLRADARVVS HEHTNLRTAP PELIPEPVDL
VVADVSFISL TLVLAPCLQW LKPGGRVVAL VKPQFEVGPG QTEKGVVRDP ALRQAAVDKV
VAYCRDALGL DLEGVVPSAI TGPKGNQEYL AAFRRR