Gene DvMF_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1440 
Symbol 
ID7173344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1761740 
End bp1762756 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content64% 
IMG OID643539947 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_002435856 
Protein GI218886535 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC TCCGCATTGC CATCAACGGG TTCGGGCGGA TAGGCCGTCA GGTGTTCAAG 
GCCATCCTGG ACCGATACCC CGACACCATG GAAGTGGTTG CCGTCAACGA CCTGTACGAC 
GTGGCCACCA ACGTTCACCT GTTGCAGTTC GACACCTGCT ACGGCCGCCT GAAGGTGGAC 
GCCGAAGTGA AGGACGGCAA CATCCACGTG GGCGACTGGG TGGTGCGCAA CTATGCCGAA 
CGCGACCCCA AGGTGCTGCC CTGGCGCGAC CTGGGCGTGG ACATCGTCAT CGAATCCACA 
GGCATCTTCC GCACCGGCCC GCAGTGCAGG GCGCACATCG ACGCCGGTGC CAGGAAGGTC 
ATCATCACCG CGCCCGCCAA GGAAGAAGAC CTGACCATCG TGCTTGGCGT CAACGACGCG 
GACTACGACC CGGAAAAACA CCACGTCGTG TCCAACGCCT CGTGCACCAC CAACTGCCTG 
GCCCCGGTCA CCCTGGCGCT GCACAAGGCC TTCGGCATCG TCAAGGGCGT GCTGACCACG 
GTGCACTCGT ACACCAACGA CCAGCGCATC CTGGACCTGC CCCACAAGGA TCTGCGCCGC 
GCCCGCGCCG CCGCGCAGAA CATCATCCCC ACCTCCACCG GGGCGGCCAA GGCCGTGGCC 
AAGGTCATTC CTGAGATGAA GGGCAAGTTC GACGGCATCA GCCTGCGCGT GCCCACGGCC 
ACGGTGTCCA TCGTGGACTT TGTGGCCGAG CTTGAAAAGC CCACCACCAC CGAAGAACTG 
CGCGCCACCC TGAAGGCCGC CGCCGAAGGG CCGCTGAAGG GCATCATGGC GTATTGCGAA 
AAGCCGCTGG TGTCGTCCGA CTTCATCGCC GACCCGCATT CCAGCATCGT GGATGCCGAA 
TTCACCACCG TGATGAACGG CGACATGGCC AAGGTGCTGG CGTGGTACGA CAACGAGTGG 
GGCTATTCCT GCCGCGTGGC GGATCTGGCG GCCCTGATGG CGAAAAAGGG CCTGTAG
 
Protein sequence
MTKLRIAING FGRIGRQVFK AILDRYPDTM EVVAVNDLYD VATNVHLLQF DTCYGRLKVD 
AEVKDGNIHV GDWVVRNYAE RDPKVLPWRD LGVDIVIEST GIFRTGPQCR AHIDAGARKV 
IITAPAKEED LTIVLGVNDA DYDPEKHHVV SNASCTTNCL APVTLALHKA FGIVKGVLTT 
VHSYTNDQRI LDLPHKDLRR ARAAAQNIIP TSTGAAKAVA KVIPEMKGKF DGISLRVPTA 
TVSIVDFVAE LEKPTTTEEL RATLKAAAEG PLKGIMAYCE KPLVSSDFIA DPHSSIVDAE 
FTTVMNGDMA KVLAWYDNEW GYSCRVADLA ALMAKKGL