Gene DvMF_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1412 
Symbol 
ID7173316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1726005 
End bp1727315 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content69% 
IMG OID643539919 
Producthomoserine dehydrogenase 
Protein accessionYP_002435828 
Protein GI218886507 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value0.874068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAGCG ACAGCGACAA GCCGGGCGGC AAGCGCCTGG TCATAGGCAT GGCCGGGTTC 
GGCACCGTGG GCAGCGGCCT TGCCCGCGTG CTGGACGAGA ACCGCCAGTG GATCACCGAG
CGCACCGGCC GCGAAATGGT CATCAAGACC ATTCTGGTGC GCGACCTGGC CAAGCCGCGC
GCCTGGCCCG TGCCGCAGGG CGCAACCCTG ACCGCCGACC CGGCAGTTCT CACCGACGAC
CCGGAAATCG ACGTGCTGGT GGAACTGATG GGCGGCATTG CCGCCCCCCA CGCCATCATC
AAGCGGGCGC TGGAAGCGGG CAAGCACGTG GTCACCGCCA ACAAGGCCCT GCTGGCCGAA
GACGGCTACG ACCTGTACCG CCTGGCCGAG CAGAAGAACG TGGGCCTGCA CCACGAGGCC
AGCGTGGCCG GGGGCATCCC CATCGTCCAG ACGCTGAAGG AAAGCCTGGC GGGCAACCGC
ATCGGCTCGC TGGTCGGCAT CCTGAACGGC ACGGCCAACT ACATCCTGTC CGAAATGACC
AGCAACGGCC TGGACTTCGC CACCGCTCTC GCGCAGGCGC AGGAACTGGG CTACGCCGAG
GCGGACCCCA CGCTGGACAT CGAAGGCCAC GACACCGCCC ACAAGCTGGT GCTGCTGATC
CGCCTGGCCT ACGGCATGGA CTACCCCTAC GCCGAACTGC CCGTGCAGGG CATTGCGGGC
ATCGACCGCA TGGACATCGA GTTCGCGCGC GAACTGGGCT TTCGCATCAA GCTGCTGGCC
CAGGTGCGCG AGGTGGACGG CAAGCTGGAG GCCGGGGTGT TTCCCACCCT GGTCAAGCAC
ACCTTCCTCA TCGCCCGGGT AGGCGGCGCG TACAACGCCA TCCGCCTGGA AGGCAACGCC
GTGGGCCCCG TGTTCCTGCA CGGGCTTGGC GCGGGCAGCC TGCCCACCGC CAGCGCCGTG
CTGGCCGACC TGATGACCGT GGCGCGCGGC GCCGCGCCGC ACAACACCGG CTTTCAACGC
CAGGTGCCGC CCCGCGCGGA CATCCTGCCC CCGGCAGACG CCGAAAGCAG CTACTACGTG
CGCGCCATGG TGCCGGACAA CCCCGGCGTG CTGCGTGACC TTGCCGGGGC CATGGCCGAC
CACTCCATCA GCATCGCCCA AGCCATCCAG AAGGGGCAGC ACCCCCAGGG CGTGCCTCTG
GTGTTCATGA CCCACGCCGC CAAGGCCAGC GCCATACAGG GCGCCATCGC CCAGGTACAG
GCGGCCGGGT TGCTGCTGGC GCCGCCCGTC TGCTACCGGG TGTTGCAGTA A
 
Protein sequence
MGSDSDKPGG KRLVIGMAGF GTVGSGLARV LDENRQWITE RTGREMVIKT ILVRDLAKPR 
AWPVPQGATL TADPAVLTDD PEIDVLVELM GGIAAPHAII KRALEAGKHV VTANKALLAE
DGYDLYRLAE QKNVGLHHEA SVAGGIPIVQ TLKESLAGNR IGSLVGILNG TANYILSEMT
SNGLDFATAL AQAQELGYAE ADPTLDIEGH DTAHKLVLLI RLAYGMDYPY AELPVQGIAG
IDRMDIEFAR ELGFRIKLLA QVREVDGKLE AGVFPTLVKH TFLIARVGGA YNAIRLEGNA
VGPVFLHGLG AGSLPTASAV LADLMTVARG AAPHNTGFQR QVPPRADILP PADAESSYYV
RAMVPDNPGV LRDLAGAMAD HSISIAQAIQ KGQHPQGVPL VFMTHAAKAS AIQGAIAQVQ
AAGLLLAPPV CYRVLQ