Gene DvMF_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1400 
Symbol 
ID7173304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1710416 
End bp1711072 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID643539907 
Productlipoate-protein ligase B 
Protein accessionYP_002435816 
Protein GI218886495 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones92 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCA TCGACCTGGG CCTCATCCGC TATGCAGAGG CCGACGCCCT GCAACGGGCA 
CGGCTGGAGG AAGTGGCGGC AGGGGCGGAA GAAACCCTGT ACCTGCTGGA GCACCACCCG 
GTGATCACCC TTGGCCGCAA CGGCGGGGGC GAAAACCTGC ACGTGGGCCG AGAATGGCTG 
GCAACGCAGG GCATAGACCT TGTGCAGTCC TCGCGCGGGG GCAACATCAC CTGCCATTTC 
CCCGGCCAGT TGGTGGCCTA CCCGGTGTTC CGGGTGGCCA AGCGGCCCGG CGGCCTGCGG 
CAGATGTTCC ACGACCTCGA AGAGGTGGTC ATCACCACGC TGGCCCACTT CGGGCTGTCC 
GCCGCCCGCT GGGAAGGCCG CCCCGGCGTG TGGATAGAAA ACCGCAAGAT ATGCTCCATC 
GGCATGGCCG TGCGCCGCTG GACCTCGTAC CACGGGTTCG CCCTGAACGT GGGGCGCGAC 
CTGTCCCTTT TCGAGATGAT CACCCTGTGC GGCCTGCCCG ACGCGCAGGC CACGTCGCTG 
TACCGCGAAC TGGGCGGCGA TGCCCCCACC ATGCAGGAGG TAAAGGATGT CTGTGCCCGG 
CAATTCCGTG CCATCTTTGC GGATTCCACC GTGGCTGCGG GTCAAGCTGC CCTGTAG
 
Protein sequence
MNIIDLGLIR YAEADALQRA RLEEVAAGAE ETLYLLEHHP VITLGRNGGG ENLHVGREWL 
ATQGIDLVQS SRGGNITCHF PGQLVAYPVF RVAKRPGGLR QMFHDLEEVV ITTLAHFGLS 
AARWEGRPGV WIENRKICSI GMAVRRWTSY HGFALNVGRD LSLFEMITLC GLPDAQATSL 
YRELGGDAPT MQEVKDVCAR QFRAIFADST VAAGQAAL