| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1312 |
|---|
| Symbol | |
|---|
| ID | 7173216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 1602444 |
|---|
| End bp | 1603436 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643539820 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002435729 |
|---|
| Protein GI | 218886408 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.0000230956 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAG GCGAATTCAA GGAGCTGGCC CGCAAGCGCA TCCTGGTCAC CGGGGGCGCG
GGGTTCATCG GCTCGCACCT GTGCCGCCGC CTGCTGGACC GGGGTGCGGA AGTGCTGTGC
GTGGACAACT TCTTCACCGG CTCGCGCGAC CACGTGCAGG AAATGCAGGA CCATCCGCGC
TTCGAGTTGC TGCGCCACGA CATCACCTTT CCGCTGTACG TGGAAGTGGA CGAAATCTAC
AACCTGGCCT GCCCGGCGTC GCCCATCCAC TACCAGTTCG ACCCCGTGCA AACCACCAAG
ACCTGCGTGC ACGGCTCCAT CAACATGCTG GGACTGGCCA AGCGGGTAAA GGCGCGCATC
CTCCAGGCCT CCACCAGCGA GGTCTACGGC GACCCGGAAA CCCACCCCCA GACCGAAGAC
TACTGGGGCC GCGTGAACCC CATCGGCCCT CGCTCCTGCT ACGACGAAGG CAAACGCTGC
GCCGAAACCC TGTTCACGGA CTACCACCGC CAGCACGGGG TGCCCATCCG CATCGCGCGC
ATCTTCAACA CCTTCGGGCC GCGCATGCAC CCCAACGATG GCCGCGTGGT CAGCAACTTC
ATCCTGCAAG CCTTGCAGGA CAAGCCCATC ACCATCTACG GCGACGGCAG CCAGACCCGC
TCGTTCTGCT ACGTGGACGA CATGGTGGAC GGCCTGACCG CGCTGATGCA CGCCCCGGAC
GACGCGCACC TGCCGGTGAA CCTCGGCAAC CCCGAAGAAC GCACCATCCT GAACCTGGCC
GAGATCATCA TCGAGTTCGT CAACTCGCGC TCCACCATCG ACTTCCGCCC GCTGCCGCAG
GACGACCCGC GCCGCCGCCG CCCCGACATT GCGCAGGCGC GCGAGAAGCT GGGCTGGGAG
CCCAAGGTGA GCATGGAAGA GGGGCTGCGG AAGACCGTGG AGTATTTCGA GGGACTGCTG
CGCTCGCGGC GGGCGGAAGG GGCGGAGGTG TAG
|
|---|
| Protein sequence | MQQGEFKELA RKRILVTGGA GFIGSHLCRR LLDRGAEVLC VDNFFTGSRD HVQEMQDHPR
FELLRHDITF PLYVEVDEIY NLACPASPIH YQFDPVQTTK TCVHGSINML GLAKRVKARI
LQASTSEVYG DPETHPQTED YWGRVNPIGP RSCYDEGKRC AETLFTDYHR QHGVPIRIAR
IFNTFGPRMH PNDGRVVSNF ILQALQDKPI TIYGDGSQTR SFCYVDDMVD GLTALMHAPD
DAHLPVNLGN PEERTILNLA EIIIEFVNSR STIDFRPLPQ DDPRRRRPDI AQAREKLGWE
PKVSMEEGLR KTVEYFEGLL RSRRAEGAEV
|
|---|
| |