| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1248 |
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| Symbol | |
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| ID | 7173151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1542510 |
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| End bp | 1544150 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643539756 |
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| Product | Mur ligase middle domain protein |
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| Protein accession | YP_002435666 |
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| Protein GI | 218886345 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.000771873 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTAGCT CTCTGTTTCT GGGCGCGGCG TTTCTTGTGT TCGCCGTGCG GCGCGGCCTG
ACCTACCTGC ACATCTTTCA GCAGGAAGAA TACGACGGCC CGCGTTTCTT GCGCTGGATG
GCCGCCGCCC GCGCCTTCGA CAAGCGCGCC ACCCTGCCCC TGCTGGCTTG CTGGGGCGCG
GCACTGGCCG CGCCAGAGTC CGCAACGTAC GCCAAATGGG CGGCGGGACT CGTGCTGCTG
GCGGTGGCCG CCGTGGAAGA CAATCCCCTC AAGGCCGCCA AGAAAAAGCT GGTGCTCACC
GCACGGGTCA AGCGCATCCT GTCCGTGGCG CTGGGGCTGA CGACAGTGTA CGCCGTGGCG
CTGGCCCTGT GCCCCGCCGC ACCCGCTGCG CTGCTGCCGT TCTGGATACT CGGGGTGCAG
GCGCTGCCGC TGGCGCTGGT TGCGGCCAAC GCATCGCTGG CCCCGGTGGA GGCGCGCATC
CAGCAGGGCT TCTGGAACGA GGCCCACGAA AAACTGCTGC GACTTGCTCC CACGGTGATC
GCGGTCACCG GCTCGTACGG CAAGACCAGC GTGAAGCACA TCCTGGCCCA CGTGCTGGGC
TGCTACCACC CCACGCTGAT GACGCCGGGC AGCATCAACA CGCCCATGGG CATTTCTCGG
ATCATCCGGG AACGGCTGAC CGACGCGCAC CGCTTCTTCA TCGCGGAAAT GGGCGCCTAC
GGCATCGGCT CCATCGAACG GCTGTGCAGG CTGGCTCCGC CCGATTTCGC CATCATCACC
AACGTGGGCC CGGCGCACTA CGAACGCTTC AAGGATCTGG CCACCGTGGT GCGGGCCAAG
TTCGAACTGG CGCACGCCAC CGTGGCCCGT GGGGGCCGGG TGGTGCTGCC CGCCGCCCTG
CTGGCGTACG ACCACGCGCG CGACTTTGCA GCCGCCAACG CGGGCGCGGT ACTGCGGTGC
GCTGGCGCGG ACGTGAACGC GGACGCGGGC GCAGGCGGAG CGGGCGTGGC GGAACCTTCG
GTGCGCGTGC TGGACGCCGG GCAGGACCTT TCCGGCATCC ACGCGCGCCT GCTGTACCAG
GAGCAGGAAT ACGAGGTGCG CGCGCCCATC CACGGCATGC ACCATGTGGA CAACGTGGCC
CTGGCCTTTG CCGCCGCGTG CGGCGTGGGC GTGGAGCCGC AGCGGGTGGT CAGCGCCCTG
CGCAGCCTGC CCCAGATCGC CCACCGGCTG GAAGTGAAAC CCCAGCCCGA CGGTTCCGTG
CTCATCGACG ACGCCTACAA CTCCAACCCC TCCGGCTTCG CCTCCGCCCT CGACCTGCTG
GACCTGTACC GCAAGTCCGG GCAACGCGGC GTGCTGGTGA CCCCCGGCAT GGTGGAACTG
GGCACCCTGC ACGACAGCGC CCACGCGGAA CTCGGCGCGC GCGCCGCGGC CTGCGCCGAC
GTGCTGCTGG CCGTGGCCCC GGCCCGCATC CCCACGCTGG TGGAGGCCTT TCGCGCTGCC
GCAGGGCCGG ATCAACTGGT GGTGGAATGC GCGGACTTTG CCGCCGCCCG CGCCTGGCTG
GCCGCCAACA TCGGCCCCGG CGACGCCGTG CTGCTGGAAA ACGACCTGCC CGACCTGTAC
GAAAAGAAGG TGCGGATATA G
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| Protein sequence | MASSLFLGAA FLVFAVRRGL TYLHIFQQEE YDGPRFLRWM AAARAFDKRA TLPLLACWGA
ALAAPESATY AKWAAGLVLL AVAAVEDNPL KAAKKKLVLT ARVKRILSVA LGLTTVYAVA
LALCPAAPAA LLPFWILGVQ ALPLALVAAN ASLAPVEARI QQGFWNEAHE KLLRLAPTVI
AVTGSYGKTS VKHILAHVLG CYHPTLMTPG SINTPMGISR IIRERLTDAH RFFIAEMGAY
GIGSIERLCR LAPPDFAIIT NVGPAHYERF KDLATVVRAK FELAHATVAR GGRVVLPAAL
LAYDHARDFA AANAGAVLRC AGADVNADAG AGGAGVAEPS VRVLDAGQDL SGIHARLLYQ
EQEYEVRAPI HGMHHVDNVA LAFAAACGVG VEPQRVVSAL RSLPQIAHRL EVKPQPDGSV
LIDDAYNSNP SGFASALDLL DLYRKSGQRG VLVTPGMVEL GTLHDSAHAE LGARAAACAD
VLLAVAPARI PTLVEAFRAA AGPDQLVVEC ADFAAARAWL AANIGPGDAV LLENDLPDLY
EKKVRI
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