Gene DvMF_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1244 
Symbol 
ID7173147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1535338 
End bp1536393 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID643539752 
Producthypothetical protein 
Protein accessionYP_002435662 
Protein GI218886341 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.00881206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTACGCC GTTTCCGTTT CATCCTGCTG TTGGCGGCGC TGCTGTCGGC CATGCTTGCC 
GGGGGCGCGG CGTTTTCGCA GGCCGCCTCG CCGCGTACTG CGTTGACGCG GGTGTGCGTG
GTGCAGAGTT ACCATTCAGG CTATATATGG TGTCATAATA TCAATGACGG CATCCGCGAC
GCGTTGCGGG ACGCGGGGGT CGTCATCGAG GTGTTCTACC TGGACGCCAA GCGCAACCCT
TCGCCCGACA GCCTGCGCGC CGCCGCGCGG AGCATTGCCG CCCGCATCGC GGAACTGGCC
CCCAGAGTGG TGATAACCGT GGACGATGCG GCGCAACTGT ACCTGGCCGT GCCGTACCTG
ATGGGCAAGG GGGGCGACGC GGGTTCGGGC AGCCCGCAGG TGGTGTTCTG CGGGGTCAAC
GCCCCGCTGG GCAGCTACGG GTATCCCGCA TCCGACGTTA CCGGCGTGCG CGAGCGCTGG
CACTTTCGCG AAGGGTTCGA CCTGCTGCGC AAGATAGACC CCCGTATCAG GAGCGTGGCG
GTGCTGCTGG ATGATTCGGA ATCCGCCGGG TACGTGCTGG CCGACATGCG CGACGACATG
GCCCGCAACG GTCCCTTTGC CCTGCAACTG TCCGACGTGG CCATGCTGCA CACCTTTCAG
GAATGGAAAC GGGCGGTGCT TTCCGCTCAG GAGCATGCCG ACGCCCTGGC GCTGGGCCTG
TACCACTCGC TGGTGGATGC CGCCACCGGC AAGACGGTGC CCGCCGAAAC CGTGCGCGAC
TGGAACCTTT CCGTGTTGCG CAAGCCCACG CTGGGCTTCA GCGATGCCAT GCGCGACCAT
GGTCACCTGT GCGGCATACT GGAGTCTGCC CACGAGCAGG GCCTGCTGGC GGGCCGCATG
GCGCGTCATC TGGTGCTGCG CGGGGGACGG GCGGGCGAGC TGCCCGTGGC CATCAACCAG
CAGGGTCTGG TGTTCGTCAA CCTGAAGACG GCGGAGCGTC TGGGGTTGGT AATTCCCTAC
GAGATCATCA AGGCGGCGGA TTTGGTCATC CAATGA
 
Protein sequence
MVRRFRFILL LAALLSAMLA GGAAFSQAAS PRTALTRVCV VQSYHSGYIW CHNINDGIRD 
ALRDAGVVIE VFYLDAKRNP SPDSLRAAAR SIAARIAELA PRVVITVDDA AQLYLAVPYL
MGKGGDAGSG SPQVVFCGVN APLGSYGYPA SDVTGVRERW HFREGFDLLR KIDPRIRSVA
VLLDDSESAG YVLADMRDDM ARNGPFALQL SDVAMLHTFQ EWKRAVLSAQ EHADALALGL
YHSLVDAATG KTVPAETVRD WNLSVLRKPT LGFSDAMRDH GHLCGILESA HEQGLLAGRM
ARHLVLRGGR AGELPVAINQ QGLVFVNLKT AERLGLVIPY EIIKAADLVI Q