Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1221 |
Symbol | |
ID | 7173124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1504235 |
End bp | 1505653 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643539730 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002435640 |
Protein GI | 218886319 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 0.0653937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCCCG TCCCCGTACC ACCCGCCGCA CCGCCGCGCA CCCCCCGCCG CTCTGCACGG CCCCGCCTGC GGTCGCTGCT GTCCCTTTTG CCCCTGCTGT TCCTGCTGGC CCTGCCCCCC CTGCTGGCCG CCTGCAACGC CGACAATCCT CACCATCAGG AAGACGCCGC CGCGCCGGGC GTCACCGACG ACGCAATCCA TCTCGCCTCA TCCCTCGCCC TGACCGGGCA TGCCAGCTAC CTTGGCGTGC AGACCCTGCG CGGCGCGCTG TCGTACATCC ACCACATCAA CGACTCCGGC GGGGTGCACG GGCGGCGCAT CCAGCTCACC GCCGTGGACG ACGGGTACGA TCCGCCCCGC TGCCTTGCCA ACACCCAGCG GTTTCTCATC GAGGGCGACG TGTTCGCCCT GTTCAGCTAC GTGGGCACGC CCACCACCAT GCGGGTGCTG CCGCTGGTGG AAGAGGCGCG CATCCCGCTG GTGGGCATGT TCACCGGGGC CAACGGCCTG CGCGAGCCGT TCAACCGCTA CGTCTTCAAC GTGCGCGCCT CGTACTACCA GGAAACCAAG GCCGCCGTGC GCCATCTGGT GCGCGACCTT GGGCTGACGC GCATCGCCGT GTTCTACCAG TACGACGCCT ACGGCTTCGA CGGGCTGACC GGCACGGAAA TAGCCCTGCG CGAACTGGGT CTGGCCCCGG TGGCGCGCGG CTCGTACGTG CGCGGCACCA CCAAGGTGGA AGACGGGCTG CGCCGCATCC TGGCCGCCGA CGCCCAGGCC GTGGTCATGG TGGGCACCTA CGAGCCCTCG GCCCGGTTCA TCCGCCTGGC GGAACAGGCG GGCCTGCGCG CGGTGTTCCA CTGCCTGTCG TTCACCGGGG CAGAGGAACT GGCCCGGCTG CTGGGCAATG CGCCGGTGAA TCCGGTGACC ATGTCGCAGG TGGTGCCGCC CCCGCGCGCC AAGGAAACCC CCGACCTGCT GACCGCAGCC GCCGACTACG TGCAGCTGCT GCAACGCTAC TTTCCCGACG AGACGCCCAA CACCATCGGC CTTGAAGGCT ACGTCAACGC GCGCATCCTG GTGGAAGGGC TGCGCCGCGC GGGCCGCGAC CTGACCCGCG AGAGCTTCAT GCGGGCCCTG GAGTCGCTGC GCGACTACCC GCTGGGCGGC AGCACCTACG TGTCCTTTTC GCCCGAGAGC AGGCAGGGCA TGAACCAGGT GTACTTCACC CGGCTGCATG ACGGGCAGTT CGAACTGATC CGCGACTTCC GCGAGGTGCA CCCCCTGCCC GGGCCAGCCC CCGTGGCCGG ACAGGATGCC CTGCCCGAAC CGGACGGCGC GTCCGGTCCG GATAACGCCT CCTCCGTACC GGACCCGGCA CCCTCCCCCA CCCCCGGCAG CGCGGAGGCA CGGTCATGA
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Protein sequence | MPPVPVPPAA PPRTPRRSAR PRLRSLLSLL PLLFLLALPP LLAACNADNP HHQEDAAAPG VTDDAIHLAS SLALTGHASY LGVQTLRGAL SYIHHINDSG GVHGRRIQLT AVDDGYDPPR CLANTQRFLI EGDVFALFSY VGTPTTMRVL PLVEEARIPL VGMFTGANGL REPFNRYVFN VRASYYQETK AAVRHLVRDL GLTRIAVFYQ YDAYGFDGLT GTEIALRELG LAPVARGSYV RGTTKVEDGL RRILAADAQA VVMVGTYEPS ARFIRLAEQA GLRAVFHCLS FTGAEELARL LGNAPVNPVT MSQVVPPPRA KETPDLLTAA ADYVQLLQRY FPDETPNTIG LEGYVNARIL VEGLRRAGRD LTRESFMRAL ESLRDYPLGG STYVSFSPES RQGMNQVYFT RLHDGQFELI RDFREVHPLP GPAPVAGQDA LPEPDGASGP DNASSVPDPA PSPTPGSAEA RS
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