Gene DvMF_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1221 
Symbol 
ID7173124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1504235 
End bp1505653 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content70% 
IMG OID643539730 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002435640 
Protein GI218886319 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.0653937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCCCG TCCCCGTACC ACCCGCCGCA CCGCCGCGCA CCCCCCGCCG CTCTGCACGG 
CCCCGCCTGC GGTCGCTGCT GTCCCTTTTG CCCCTGCTGT TCCTGCTGGC CCTGCCCCCC
CTGCTGGCCG CCTGCAACGC CGACAATCCT CACCATCAGG AAGACGCCGC CGCGCCGGGC
GTCACCGACG ACGCAATCCA TCTCGCCTCA TCCCTCGCCC TGACCGGGCA TGCCAGCTAC
CTTGGCGTGC AGACCCTGCG CGGCGCGCTG TCGTACATCC ACCACATCAA CGACTCCGGC
GGGGTGCACG GGCGGCGCAT CCAGCTCACC GCCGTGGACG ACGGGTACGA TCCGCCCCGC
TGCCTTGCCA ACACCCAGCG GTTTCTCATC GAGGGCGACG TGTTCGCCCT GTTCAGCTAC
GTGGGCACGC CCACCACCAT GCGGGTGCTG CCGCTGGTGG AAGAGGCGCG CATCCCGCTG
GTGGGCATGT TCACCGGGGC CAACGGCCTG CGCGAGCCGT TCAACCGCTA CGTCTTCAAC
GTGCGCGCCT CGTACTACCA GGAAACCAAG GCCGCCGTGC GCCATCTGGT GCGCGACCTT
GGGCTGACGC GCATCGCCGT GTTCTACCAG TACGACGCCT ACGGCTTCGA CGGGCTGACC
GGCACGGAAA TAGCCCTGCG CGAACTGGGT CTGGCCCCGG TGGCGCGCGG CTCGTACGTG
CGCGGCACCA CCAAGGTGGA AGACGGGCTG CGCCGCATCC TGGCCGCCGA CGCCCAGGCC
GTGGTCATGG TGGGCACCTA CGAGCCCTCG GCCCGGTTCA TCCGCCTGGC GGAACAGGCG
GGCCTGCGCG CGGTGTTCCA CTGCCTGTCG TTCACCGGGG CAGAGGAACT GGCCCGGCTG
CTGGGCAATG CGCCGGTGAA TCCGGTGACC ATGTCGCAGG TGGTGCCGCC CCCGCGCGCC
AAGGAAACCC CCGACCTGCT GACCGCAGCC GCCGACTACG TGCAGCTGCT GCAACGCTAC
TTTCCCGACG AGACGCCCAA CACCATCGGC CTTGAAGGCT ACGTCAACGC GCGCATCCTG
GTGGAAGGGC TGCGCCGCGC GGGCCGCGAC CTGACCCGCG AGAGCTTCAT GCGGGCCCTG
GAGTCGCTGC GCGACTACCC GCTGGGCGGC AGCACCTACG TGTCCTTTTC GCCCGAGAGC
AGGCAGGGCA TGAACCAGGT GTACTTCACC CGGCTGCATG ACGGGCAGTT CGAACTGATC
CGCGACTTCC GCGAGGTGCA CCCCCTGCCC GGGCCAGCCC CCGTGGCCGG ACAGGATGCC
CTGCCCGAAC CGGACGGCGC GTCCGGTCCG GATAACGCCT CCTCCGTACC GGACCCGGCA
CCCTCCCCCA CCCCCGGCAG CGCGGAGGCA CGGTCATGA
 
Protein sequence
MPPVPVPPAA PPRTPRRSAR PRLRSLLSLL PLLFLLALPP LLAACNADNP HHQEDAAAPG 
VTDDAIHLAS SLALTGHASY LGVQTLRGAL SYIHHINDSG GVHGRRIQLT AVDDGYDPPR
CLANTQRFLI EGDVFALFSY VGTPTTMRVL PLVEEARIPL VGMFTGANGL REPFNRYVFN
VRASYYQETK AAVRHLVRDL GLTRIAVFYQ YDAYGFDGLT GTEIALRELG LAPVARGSYV
RGTTKVEDGL RRILAADAQA VVMVGTYEPS ARFIRLAEQA GLRAVFHCLS FTGAEELARL
LGNAPVNPVT MSQVVPPPRA KETPDLLTAA ADYVQLLQRY FPDETPNTIG LEGYVNARIL
VEGLRRAGRD LTRESFMRAL ESLRDYPLGG STYVSFSPES RQGMNQVYFT RLHDGQFELI
RDFREVHPLP GPAPVAGQDA LPEPDGASGP DNASSVPDPA PSPTPGSAEA RS