Gene DvMF_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1213 
Symbol 
ID7173116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1491817 
End bp1493421 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content70% 
IMG OID643539722 
Productsigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_002435632 
Protein GI218886311 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.192414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAG GGACGACACA GGGCATGGCC GCGGCGCTGG GACCGCTGCT GCAAGGGCTG 
TTCGATCAGC CGGTGGCGGC GCGGACCCTG CTGGACCGCA TCCCCTTGCC GCTGGCGCTG
GTTTCCGCCG AGCGGCGGGT GATGTTCCTG AATCAGGCGG CCTGCGCCCT TACGGCCATG
TCGCCCGAGC GGGCCCAGAA CCTGCCGTGC CGCTACGTGT TTCGATGCAG CCTGTGCACC
GGGGGCTGCC CGCTGGACGT GGTGGACAAG TCGCCCACGG CTGCCGTGGC CCCCGTGGCG
CGCGAGGCGG ACATCGTCAA CGCCGACCGC GCGCGCATTC CCGTGCGGGT GACCTGCGGC
GCGCTGACCG CGCCCGACGG CAGCCGGGTG GGCTACTTCG AGACGCTGGA GGATCTGCGC
CTGTTCCGCC CGGCAGAGGC CCGGCCGGAG TGGCCGCAGG GCTTCGGCGA CATGCTGGGG
CACAGCCCCG AGATGGAGCG GGTGTTCCGG TTGCTGCCGG GCATCGCCCA GACGGATTCC
TCGGTGCTGG TCACCGGAGA AACGGGCACC GGCAAGGATC TGCTGGCCGA GGCCCTGCAC
AATGCCTCCA CCCGGGCCAA GGGACCGTTC GTCAAGGTGA ACTGCGGCGC CCTGCCGGAA
AGCTTGCTGG AATCCGAGCT GTTCGGCCAC CAGAAGGGCG CGTTTACCGG GGCGTCGGAA
AACAAGCCGG GCCGCTTCCG GCTGGCCCAC AACGGCACGC TGTTCCTCAC CGAGGTGGGC
GACCTGCCCC TGCCGTTGCA GGTCAAGCTG CTGACCTTCC TGGACGACAA GATCATCCAT
CCGCTGGGCT CCACGCGCGG GGTGCACGTG GACGTGCGCA TCATGGCCGC CACCCACCGC
GACCTGCGGC GCATGGTGCG CGAGGGGCGC TTTCGCGAGG ATCTGCTGTA CCGCCTGAAC
GTGGTGCGTT TTCACCTGCC GCCCCTGCGC GAGCGCGGCG ACGACATCGC GCTGTTTCTG
GCGCATTACC TCAAGGTGTA CGCGGGCATG TTCGGCAAGC GGCTGACCGG GGTCTCCCCG
GCGGCGGAGC GGGTGCTGCT GCGCCACGCC TACCCCGGCA ACGTGCGGGA ATTGCGCAAT
ATCGTGGAAT ACTGCGTCAA CGTGTGCCAG GAGACCCACG TGGACCTGCC GCATCTGCCC
CGCTACCTGC TGGAAGAGAG CGGCGAGCCC GATGCCGCCG AAGGGGGCGG CGTGGCGACC
GTTGGCCAGC GGGTGGGGAC GGGGGCGCAA GCCCCGCGTG GCGGCGGCGT GGCTGGGGCG
GATTCCGGCG CTGCGGGCGC GGGCCTGTCA GGTCGTTCAA GGCATCCGGG TCATCCGGTA
CAGGGCGGCC CCCCCGGTTC TTCCGGCTCT CTCGGTTCTC CTGACCAGGG CGTGCCCTTC
GCCGGGGTGC CCCAGGGGGA TGCCACGTGG GCCGAGGCGG AGCGTCGCCT GATCATGGAG
GCGCTGGTGC AGGCGCGCGG ACGGCGCGGC GAGGCCGCAA TGGCGTTGGG CTGGGCGCGA
ACCACATTGT GGCGCAAGAT GCGCCAGTAC GGGTTGGATC AATGA
 
Protein sequence
MAEGTTQGMA AALGPLLQGL FDQPVAARTL LDRIPLPLAL VSAERRVMFL NQAACALTAM 
SPERAQNLPC RYVFRCSLCT GGCPLDVVDK SPTAAVAPVA READIVNADR ARIPVRVTCG
ALTAPDGSRV GYFETLEDLR LFRPAEARPE WPQGFGDMLG HSPEMERVFR LLPGIAQTDS
SVLVTGETGT GKDLLAEALH NASTRAKGPF VKVNCGALPE SLLESELFGH QKGAFTGASE
NKPGRFRLAH NGTLFLTEVG DLPLPLQVKL LTFLDDKIIH PLGSTRGVHV DVRIMAATHR
DLRRMVREGR FREDLLYRLN VVRFHLPPLR ERGDDIALFL AHYLKVYAGM FGKRLTGVSP
AAERVLLRHA YPGNVRELRN IVEYCVNVCQ ETHVDLPHLP RYLLEESGEP DAAEGGGVAT
VGQRVGTGAQ APRGGGVAGA DSGAAGAGLS GRSRHPGHPV QGGPPGSSGS LGSPDQGVPF
AGVPQGDATW AEAERRLIME ALVQARGRRG EAAMALGWAR TTLWRKMRQY GLDQ