| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1179 |
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| Symbol | |
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| ID | 7173081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1457287 |
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| End bp | 1458444 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643539690 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002435600 |
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| Protein GI | 218886279 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCGT GCCCTGAGGC GGCTGGGGCC GCCGCTGACA GCATTGCCGC TGCCGCACGG
GACGCCTCCG GCCCGGGCAC GGGCGCGGGC ATGGGCCGTG GCATCGCGCG GGCGGACGGT
TGCGCCAGCG GGCCGCGTGT CCGGGGGGGC CTGACCGGCA AGCTCCGCTG GCTGCTGCTG
GCCGTGGCCC TGCCGGTGCT GGTCACCGCA GTGCCCCCTG CTTCCGGAGC CCGGCCCGCC
GACACGCGGG CTGCCGCCCC TCAGACCGTC GCCACCGCGC CCGCCCCTGC GGCCCGGCAC
ATCCCGCCTG CTTCCGCATC GCTGCACGTG CTGTTTGATG AAGATCTGCC GCCATACTCC
TACAAGGGAA AAGGCGCACA ACCAGGCGCG CGCGGCATCT ACCCGGAACT GGCGGCAGAG
GCATTCCGCC GCCTGGGTCT TGCGGCAACC ATGGTACCCG CCCCGTGGGC CAGGGCCATG
GCGGAACTGA ACCATGAATG CGCTGGAGAA GGGGGTGGCG AACGGTCAGG AAAAATATCC
GGGGAACGAT CTGGGGAGTG TGTCGGGGGC CACGCCGGGA GGCGCATCGG GGCATGCGGC
CTGTACGTCA CTGCCCAACG CCTGTTGCTG CACGACTTTT CCGCGCCGCT GTTCGAAGAG
CACCTGCATC TGGTGTTTCC GGCAAGCGCC ACGATTCCCG AGGCCCTTGC GGGGGCTGGC
GGGGTGGTGC CTGCGGGATT CGACGGAACG GCCACTGCGG GGGCGGGAGG AACGCCGCTG
GCCGCGCTGC GGGGCATGCG GCTGGGCGTG GTGCGCGGGT GGAGCTACGG CGACACGCTG
GACGCCGCGC GCGAGGCGGG CGCCTTCATC GCCGAGGAAG CGGGCAGCGA GGCCCAGAAC
CTGCTGAAGG TGGCCGGGGG GCGGCTGGAC GGGGCCATCG TCACCCGCGA AGGGGCGCTG
TGGCTGCGTG AACGGCTGGG ACTGACCTCC CTGGTGACCA TGGCGCCGCA CCCGCTGGCG
GTGCTGCCGG TGCACCTGGC CTTTCGCAGA CAGGACGCGC AGCATCACTT GTTGCGCGAT
TTCGATGCGA GCATCCGGGA CATGAAGGCC GACGGCACCT ACGCCCGCAT CGTGGAGCGC
GCCCTGAACG GGCAATAG
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| Protein sequence | MSPCPEAAGA AADSIAAAAR DASGPGTGAG MGRGIARADG CASGPRVRGG LTGKLRWLLL
AVALPVLVTA VPPASGARPA DTRAAAPQTV ATAPAPAARH IPPASASLHV LFDEDLPPYS
YKGKGAQPGA RGIYPELAAE AFRRLGLAAT MVPAPWARAM AELNHECAGE GGGERSGKIS
GERSGECVGG HAGRRIGACG LYVTAQRLLL HDFSAPLFEE HLHLVFPASA TIPEALAGAG
GVVPAGFDGT ATAGAGGTPL AALRGMRLGV VRGWSYGDTL DAAREAGAFI AEEAGSEAQN
LLKVAGGRLD GAIVTREGAL WLRERLGLTS LVTMAPHPLA VLPVHLAFRR QDAQHHLLRD
FDASIRDMKA DGTYARIVER ALNGQ
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