| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1174 |
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| Symbol | |
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| ID | 7173076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1450710 |
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| End bp | 1452059 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643539685 |
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| Product | cobalamin (vitamin B12) biosynthesis CbiD protein |
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| Protein accession | YP_002435595 |
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| Protein GI | 218886274 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
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| TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 0.793158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCC TGCGCCTGCT GTTGCGCGGA GAGGCCCCGA ACAGCGTGAC CGTGCCGCTG
CCGCCGTTCA CCGTCGAGGA CCATGCGAAG GGGGGCAGCG GGGATGATGC CGCCCCGGCA
GGCTGGCTGG ACGTGCCCGT GGAGACAGTG GCACGCCTTG ACGGGGCCCG CGCGGGCACC
CGCGCGGCGC TTGGGGTGGT AATCAAGGAC GGCGGCGATG ACCCGGACGC CACCCACCGG
GCGCGCATCG AGGCGCTGGT GGAATGCGCC CCCGCAGGGA TGCCCCTGCC GCAGGACGTA
AACGACTTGC CGGAAATCGG GGATGGCCTG ACGGAGACCG GAAACGGCTC GCCCCATCTG
CCCGATCTGC CCCGTCTGCC CGGTCTGCCC GATCTGCCCG TTGCGCCCGG CATGCCCGAC
CTGCTCCTGC CCTTTCCCGG TGGCGAGGCA TCCCCCGGCG GCCCGGACAT CTCCACGCCG
CAGGTTGCCC CTTCGCCCCC CCCTTCATCC GGCCCTTGCC CCCCGCGCGA CGGGGTCACC
GTGCTGCTGC GCGGCGGCAC GGGCGTGGGT CGCGTCACCC TGCCCGGACT GCCCGTGGCC
GTGGGCGAAC CGGCCATCAA CCCCGAACCG CGCAGGCAGT TGGCCTTCGC CGTGCACCGC
GAGTGCGCGG CGGCGGGCTG GCGCGGCACA GTGCGCGTCA CCGCGCGGGT GCCAGAGGGC
CAACGCATGG CCCGGCACAC CCTGAACCCG CGCCTGGGCA TCGTGGGCGG CATTTCCATC
CTGGGCACGC GGGGCACGGT GCGCCCCTAC AGCCACGACG CGTGGCAGGC CGCCGTGGCC
CAGGGGCTGG ACGTGGCCCG CGCCGCCGGG CTGACCGAGG TCTGCCTGTC CACCGGACGG
CGCAGCGAAA CCCTGCTCAT GCGCGCCTAC CCCGCCCTGC CGCCGCTGGC CTTCGTGCAG
GCGGCGGACT TCGCGGCGTT CTCACTGGCA GCCGCCGCGC AGCGGGGCTT TGCCCGCGTG
GCCTGGGGCT GCTTTTTCGG CAAGCTGGTC AAGCTGGCGC AGGGGCTTCC GCACACCCAC
GCCCACACCG CGCCACTGGA CCTGCCCCTG CTGGCCCAAT GGGCGGCGGA CGCGGGCGCG
GGGGCGGAAA CCCGCGCGGC GGTGGCCGAC GCCAACACCG CCGGGCAGGC CCTGGAACTG
CTGCTGGCCG ACCCGGCCCA CACCGCCGTG CTGCGCGCCG TGGCCCGGCG GGCCCGCGAT
GCCGCCCATG GCTGGACAGG CGGGGCGGAA AGCGTCACGG TGACGGTGCA TCTTTTCCAC
ATGGACGGCA GATGTCTGGT GACGGCATGA
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| Protein sequence | MAALRLLLRG EAPNSVTVPL PPFTVEDHAK GGSGDDAAPA GWLDVPVETV ARLDGARAGT
RAALGVVIKD GGDDPDATHR ARIEALVECA PAGMPLPQDV NDLPEIGDGL TETGNGSPHL
PDLPRLPGLP DLPVAPGMPD LLLPFPGGEA SPGGPDISTP QVAPSPPPSS GPCPPRDGVT
VLLRGGTGVG RVTLPGLPVA VGEPAINPEP RRQLAFAVHR ECAAAGWRGT VRVTARVPEG
QRMARHTLNP RLGIVGGISI LGTRGTVRPY SHDAWQAAVA QGLDVARAAG LTEVCLSTGR
RSETLLMRAY PALPPLAFVQ AADFAAFSLA AAAQRGFARV AWGCFFGKLV KLAQGLPHTH
AHTAPLDLPL LAQWAADAGA GAETRAAVAD ANTAGQALEL LLADPAHTAV LRAVARRARD
AAHGWTGGAE SVTVTVHLFH MDGRCLVTA
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