Gene DvMF_1161 details

Gene Information

• Locus tag: DvMF_1161
• ID: 7173063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1429589
• End bp: 1437202
• Gene Length: 7614 bp
• Protein Length: 2537 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643539673
• Product: Hemolysin-type calcium-binding region
• Protein accession: YP_002435583
• Protein GI: 218886262

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 64
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCCGTT CCCCGCAGGG TGCCGCCGGG CGCGGCGCCG CCCCCGCCAC CGACCCCGTC 
ACGTTGCTCC TGCCCGCCGC CGGGCAGGAG CTCCACTTCG ACGCCAACGC CGATTCCCGC 
TTCGCCCTGG GCTTTCCCAC CGACGCCGCC GCCCTGGAAC GCAACGGCGA CGACCTGGTG 
TTCAGCTTTC CCGACGGCGG CCGCATCGTG CTTTCCGGGT TTTTCGAAGG CAACAACGCC 
GACCTGCTGC CGGAATTCAG CCTTCCCGAA GGCGGCACCG TTTCCGGCTA CGATTTTCTG 
GCCGCGCTGG AGCCCGACCT CCTGCCCGCC GCGGGCCCCG GCGCGGGCGC GGGCGCTGCC 
GGTGGCGGCG TGGGCGACTA CAGCGACGAC CCTGGCAGCC TCATCGCGAG TATTGACCGA 
CTGGATCCGC TGACGCCGTT CTTCTGGAAC AGCGCCGTGG AACCCACCCT GGAAGCCGAA 
GGCCCGCTGG ACACCGCGTC CGGAACGCTG ACCTTCACGC TGCTGCCGGT AAATCCCGAC 
GGCAGCCTGG CCAGCACACT GGGCGGCTAC GAGGACAACA GGCCCAACCA GCACCTGGAC 
CCCACCGGCG GCAACGAGCA GCCGTTGCAA CTCACCGTGG TGTTCACCCC GGCAGACAAC 
GAGGTGCTGA CCGAACTCAG CCTCACCGGC TTCCATGAAG GCACCACCAT CAGCATCGGC 
GACCCGTCCT TCGGCCCCGG CAGCTTCGTG GTGACCTGGC CCGGTCAGAT CGTCACGCTG 
ACCCCGGCGC AAATCGCGGC GGGCGTCTTC GTGCGGCCGC CGGAAGACAG CTCCGCCGAC 
ATGAACCTGT CGGCCACCGC CGCCATCACC GACCCGGATT CCGGCCTGAG CAGCGTTATT 
TCCGGCACCT TCACCCTGGT CATCGACGCA GTGGCCGACA AGCCCGCACT GGAAGCCACG 
GCGCAATCTG CCCCGGCTGC CGAGGAAACG CCCGTCACGG TGCACGCGGC GGCCACCTTC 
ACCGACCTTG ACGGCTCGGA ACGCCACTTC ATCGAAGTGC GCGACATCCC CACCGACTGG 
GTACTTACCG GTGCGCTGCC GCAGGGTTGG GTAATCGTGG ACCCGGTCAC CCATCAGCCC 
ATTGCCACGC CGGTGCACGA CCTGGGCGAA AACACCACCT ACACCCTGGT CATCGAGGTA 
ACGGACGCCA CCACCGCCGG TTACGGCGGC GTCAATTCCG GCGACAGCGC CAGCATTGGC 
GCCGACCTCA CCTTCAACCC GCGCGACTGG TCCGACGAGC GCTGGGGCGA CGCCACCCCG 
CGCGACGGCG AGGGCGGAAC CACCCTGACC GTGGCCGCCG TGGCGCAGGA AACCGTGACC 
GACGGCGAAC TGACCACCGG CAACAACATT TCCGAGACCA CGGAAACCGT CGTGGTCTCC 
CGCACGGAGG ACCATCCGGA CATCACGCCG GAAGGCTCCA CCGGCCATGC CCTGACCCTG 
GTGGCGGACG AGACCGCCGG GGTGCAGTTG CATGGCGGCA AGGGTGACGT GGATCCGTCC 
ACCCCGTCCG GGCTGTCCGC CTCGGTCAAT GCGGTGCTGG CGGGCCTTGG CCTGTCCGCC 
GCCGATGCCC TGTCGGCCAC GCGGGGCAGC GTGACCTTCA ACCTGCATTC CGACGGCAGC 
GGTGAAGCGG CGGGCAACCA GGCCTCGCCT TCCGCCGTGT CCATCGCCTG GGACGCCGCG 
CAGGCCGTGC CGGAAGGCAC CGTGCTGCGC ACCACCTCGG GCGCGGACAT TTCGCTGGTT 
GTGGATGAAA ACGACCCGCA CGTGCTGCGC GGCGTGTTCA CCGAGGGCGG CGTACAGCAC 
ACCGCCTTCG TGGTGGTCAT TGCCGATGCC AACCTTTCCG GCGCGGGTTC GGCCACAGTC 
ACCTTCGTGC AGTATACCCC GCTGGCCCAC GGCAACACCG GCAACCACGA CGAGGGGCTG 
GATCTGCCGA CATTCTCGTT CACCGTCAGC GACGACGAGG GCGACACCGC CTCGGCCACT 
GTGCAGGTGA CGGTGCGCGA CGACGGCCCC ACGGCCAACG CGGACAATAA CACCTTCGAC 
GAGGCCACGG TGACCGCCAT CGACGGCAAC GTGCTGACCG GTGAAAGCTC GCACGGCACG 
GACAGCACGC CCGACGCATC CGGCACGGAC GGCTGGGCTG GCACCGACGG GGGGACGGGC 
AGCGGCGCCG TGACGGGCTT CTCGGTGGTG GTGGGTTCCA CCACCTACAG CGGCCTTGCG 
CTGGACACCC CGGTGACCAT CCTCAACCCC GGCACCTCCG TCCCTGCGGG CACCTTCACC 
CTGCATGCCG ACGGCAGCTA CACCTTTACC CGTGCGCCGG GCCAGGACAT TGCAGATTCC 
TTCACCATGA AGGTCAACTA CACGGTCAAG GACGGCGACG GCGACACAGC CTCGTCCACC 
CTGACCCTGA AGCTGAACGC CGCGCCCACC CTGCAACTTT CGCTGACCGG CGATTCGCAG 
GTGTACGAAG ATGCGGCCCA CGGTGCCCGC GTGAACCCGG CGGGCTCCAC GGGCGGCGCG 
GACGGCTGGA ACGCCAGCGG CGACAACAGC CACGACATCG CCACCTACAC GGTCAACTGG 
TCATACGCGG GCGGGCGGGC CACCGGCGGC ACCTTTGCCG CGGGTTCCTT TGCCTTCGAC 
GTGACGCTGA AGGACGGCTC CGCCAAGTTC GACGCCGACA CCACCAACAA TACCACCATG 
GCCAACACGG GCGACGTGAC CTGGGCCGTG CCCAACGGCA GCGGCGGGTG GACGGCCATG 
ACCTTCAACC TCACCACCGC CGACGGGCGC GCCGCGCTGG TTGCCGCCCT TAACGCAGAC 
CTGGCCGAAC GCTACGGCAG CAACGCCGAA GGCGAAAGCT ACGTGCGGGT CAGCGGCGTT 
TCCGCCGACG GCAAGACCCT GACCTTCACC GTACTGGACG GCTGCCCGCT GGACAACGCA 
CTGCCCGTGC GGGTGGCCGC CATCGACGAC AGGCTGGGCG ACAACAACGA AAACTACTCG 
GTGCAGATCG GCAACATCCA CCCGGCGGAA GACACCCCGT CCAGCATGGA CGTGGTCATC 
GCCGGGCAGC GCAGCCAGAC CACCACCGTG TACGACGAAG GCAACGCAGC CGAAGGCGAC 
GGCTTTCGCG TGGGGCTGGA AAGCCCGGTG CCCGCGCAGG AAAGCGACGG CACGGCCCAG 
CTCACCGTGG TGCTCTACGA GAAGGACGGC GACCTGTACA CGCTGAACGA AGGCCCCGCG 
CAGAACATCA CCGTATCGCT CAAGTTCGGC GCCACGGGCG ACACCGCAGG AGCCGACCAG 
GACTACTTCA CCACCACCTC GTACACCCTG AAGCCCACCG ACTGGACCTG GAACGCCACG 
GAAGGCCGCT GGGAAGCCAA GGTGCCGGTA ACGCTGGCCG ACGACCGACT GAGCGAGGGC 
AGCGAAAGCT TTACCGTGAA GCTTACCGGC GTGTCCGGGC ACGAGGCCGG GCTGAACGAC 
GCCAAGACCA CCGCCACGGT GACCATTACC GACGACACCG CCGCCGGGCA CGAAGCGAAG 
CTGGACGGCC CGTCGCTGGA ATACTTCGGC CCGGAAACCG TGGTGCGCGA ACCCGTGGCC 
CCCGGCGAAT CCGCCGAGTT CACGGGTGGC GTCAACACCA CCGGCACGGT GAACACCGCG 
GGCTACACCA TCATCCTTAC GGAAGTTGCC GCGCAGGATG TGGTGGTATG GCTGAAGCTG 
GGGTCCGCGG GCCTCGGCAC CGACTTCCGC ACCGGCACCG GCCTGCACGC GGCATCTGAC 
GTTTCCGGCC TGCCCGGCTA CGCCGACCGC CCCGAAGGGG CCGACTTCTA CGTCATCGTC 
AAGGCGGGCG CGGCATCGGC CCGGTTCACC GTGGACATCC TGCACGACCA CGACACCGCC 
GCAGACGGCC ATGGCGTGGA TGCGGGCACG GACACCGTGT CGTGGACCAT CGTGGACATG 
CAGGGCAGCG AAGTACGCTT CACCCCCGGC GATTCCGGCT CCACCAGCAC GGAAACCATC 
GCCGACGACA TGCGCGGCCC GGTGGTGTCC ATCACCGAAC TGGACGCCAC CCAGAACACC 
GCCGACGGCA CCACCACCAT CAAGGTGGGC CTGGGCAATG ACGCCGACGG CCACGCCACG 
GCCAACGAGG ACGTCACCGT CACCCTTCAG GTGGTTGGCA GCGACGGCAG CGTGCACGAA 
TACACCGTGA CCATTCCCGC CGGGCAGGAC ACGGGCAGCC TTACCCTGCC CATCCCGCAC 
ACCGACTATT ACCACGTGCG CGTGGTGGGC ACGGATGGTG GCGAAACCCG CCATGACGAC 
GGGTTCCGCT TCGTGGACGT CACCGGGCCA GGCGGTGGCG GCGGCACCGA CCATGGCCGG 
GTCACCCTGG GCCTTGCCGC GCACGACCTG CCGGAAGGCG CCAGCCACGA CGGGGTGAAC 
CAGGCGGTGT ACACCGTCAC CGGCAGCCTG TCGGACAATT ATCGCCCCCT GCTGAACGGC 
GACGTCAGCT TTACCCTGAA GACCTTCGAC AACAGCGCGC ACAGCCCGGC CGACTACACG 
GCGAGCAACG TGACCGTGAC CGTGGATTCC GGCCTGATGG TGCTGGCCAA GATGTCCGCC 
ACCGACAGCT TCTCGGTGGA TGTCCTGGAG GACGGCACGG CGGTGTTCAC CATCCCCGAC 
CTGCAATTCC TGGGGGGGAC GCATGCGGTG TCCATCAGCT TCGCACCAGA CGGCACGGCG 
GCCATCTTCG TGGATGGCAC GGCCGCCGAC GGGCTCATCG CCACCCTGAT CGAAGACCAC 
CTGCTGCACG GCGCCGTGAC CGTAACCGGC CCGACGCCCA TCGTGAGCGT GGTGGACGAC 
CACCGCGTGG AAGGCGACGA GACCTATTCC GTGGTGCTGT CCAACCTCAG CGGCAACGCC 
ACCGTGGCCG GTGACGGGCA CGGCGCCATG GACAGCGTGA CCATCATCGA CAACGACGCG 
CCCACGGTGC TGGTAACCAT CAGCGATCAT ACCGGCGCGC AGACGGACAC CGCCACCGAA 
GGCCAGGCCC ACCCGCTGAC GGTCAGCGTC AGCCTGGTGG ACGCGGATGG CCACCCCCTG 
GCCCTGGGCG ACGGCCCGGT GACCTTCCAG CTTACCTTCT CCGGCACGGC GGAACAGGGC 
AAGGACTTCG CGCCTTACAC CACCCTGGTC ACCATTCCGG ACGGCGGGTC CGCCGCCTCG 
GTGCAGGTCA GCCTGCCGGA TGATTACATC AGCGACGGCA ATCGCACGTT CGTCGTGACA 
GCCACCCCCG TAGCCAACGA CCCGTACAAC GGCTATCCCG CCGGGTTCAT CGGCAGCGGC 
AGCAGCGCGG AAGTGACCAT CATCGACCAC GTCAACGGGC CGGACGTCAC GCTGACGGCA 
TCCACCACCA GCATCTCGGA AAACAACGGT TCCGCCAGCT TTGGCATATC CATGGACAAG 
GCCGTGGAAG AAGACGCCAC CTTCACCGTG CGCGTGGACT TTGGCCCCGG CATGACAGAG 
GCGGATCTGG CCGGGGTGAA GATAGGCAGC GGCAGCGTGT CCACCGCCGG AATCACCAAG 
GTTCTCGGTG CGGACAACGT CACCGTGACG GGCTGGGAAT TCCAGGTCAC CGTGCCCAAG 
GGCAGCGCGG GGGGCGGCGC CTTCAGCGTG GTGACCAGGA ACGACTACGA GACCGAGGGC 
AAGGAAACCT TCACCGTGTC GCTGGTGGAC AGCCACGGGG GCGAAATCGG CAGCCTTGGC 
GCGGCCCATA CCGTCACCGT CAACGACACC CTGGACGGTC CGCAGGTGTA TCTGGACACC 
AAGGGCGGAT ACGGTACGGC GGAAGAAGGC GGCAGCGCGG AACTGCACAT CGGCATGACC 
AAGACCGCCG TGGCCGACTT CAGCGTGGAC CTTACCGTGC AAACGCCGGA ATTGCTGGTG 
CCCGGCTCCA CCGCCACGCT GTGGATCAAG ACCGCCAGCG GCGACTGGCA GGCCGTGGAC 
ACAGCCGTTG CCATCGGCAC GGACGGCTCG CTGCGGGTCA CCGTGCCCGC CGGGACCGTG 
GACGCCAAGG TGCAGTTCGA CCTTGCAGGC AACGACATGG TGGGTGACAA GCACACCTTC 
ACCGTTACCC TGGACGGCGT GGCAGACGGC GAAAGCGCGG TGCGTTCGGT GGGGTCGCTC 
ACTGCCACCT TTGCCGAGGA AAGCCACAAC GCCATTACCT ACCAGTTTGC GGGTTCCGCG 
CCGGACAGCA ACGCGGTGGT CACCTACACC CTGAAAGGCG TGGCCTTCGC CAACGTGGTA 
TCGGTGACCG TGGATGGACA GCCGGTGACC ATCACCAAGG TGGGCAGCCA GGCAACCTTC 
ACGGTGACTG GCGCGGCGGG CGCGGCCATA TCGGACCGCA TCACCGTCAC CTTCAAGGAT 
GCCAACGCCG CCGCCGACAA GGCCGCCCTG ACCATTGGCA GCAGCGTGCG CCTGAGCGCG 
GACATCGCGG TGACGGATAC CACCCCCGGC CTGATGGCGG CGGCCACGCT TATCGCGCTT 
ACCGGCGACG AGGCCGCCCT GGCCACGGGC GTGCTCCACA CCAGCGACCT GCTGGCGGGC 
GTGGAAGACC CCAGCCCCCA TGGGGCAGGC ATCGGCTTCG GGGCCAACGC CTCGGCAGCT 
GACGGCATGG GTCACACCGG GTCCGGCTGG ACGGTGGACA CCGCCAGCGG CGAGCTGCAC 
TACAGCCTCA CCGGTGACGG TCACTATACG TACACCGCGC ACGACCTGGG CGATGCGGCG 
GACAAGGTCA CCGCCACCCT GACCACCCAC GTGCAGACCG GCACCGTATT CGACGGTTCC 
GACGATGCGC ACGGCATCGG CCTCATCGTG GCCGGGTCCG CCCATGGCGA CACCATCACC 
GGTTCCAGCG GCGACGATCG CATCCACGGC GGCGCGGGCA ACGACCACCT GTACGGCGGG 
TCCGGAAACG ACGTGCTGCA CGGCGGTGAT GGTAATGACG TGCTGCACGG CGGTGACGGC 
AACGACTACC TTGATGGTGG CGCGGGGGTG AACACCCTGT ACGGCGATGC GGGCGACGAC 
ACCCTGGTGG TGCACGACAC CGGCGGCGGC ACGGGCGTGG CGGACGGTTA CCTCGACAAT 
CACGACTTCG CCGGGCTGCA CGGCGGTGAC GGCTACGACA CACTGCTGGT GCAGGGCGAG 
GACGTGACCC TGGACTTCAG CCGCATCGCG GCGGACACGG TGACAGGCAT CGAGGCCATA 
GACCTTACCG CCCACGGCGC GCAGCACGTC ACCCTCAGCC TGGACGACCT GACCTCCAGC 
GACACCGGTT CACTGGCGGT GGTGTTCGGC GAGACCCCGG TGCTTTCCGC CAGCACGGCG 
GCCAGTTCGG AACACGCAGC CGACGGCTCG GTCACCTTCA CGGCGGCGAG GGGCGATTCG 
GTGACCCTTA CCGGCCTTAC CTCCATCCAG ATCGCCAGCA TCGGCGACCT GACCGATACC 
CATGACCACC AGTTGCTCAT CCACCAGGTG GTCAGCTCCA CCTCGGGCGG GTAG 

 

Protein sequence

MTRSPQGAAG RGAAPATDPV TLLLPAAGQE LHFDANADSR FALGFPTDAA ALERNGDDLV 
FSFPDGGRIV LSGFFEGNNA DLLPEFSLPE GGTVSGYDFL AALEPDLLPA AGPGAGAGAA 
GGGVGDYSDD PGSLIASIDR LDPLTPFFWN SAVEPTLEAE GPLDTASGTL TFTLLPVNPD 
GSLASTLGGY EDNRPNQHLD PTGGNEQPLQ LTVVFTPADN EVLTELSLTG FHEGTTISIG 
DPSFGPGSFV VTWPGQIVTL TPAQIAAGVF VRPPEDSSAD MNLSATAAIT DPDSGLSSVI 
SGTFTLVIDA VADKPALEAT AQSAPAAEET PVTVHAAATF TDLDGSERHF IEVRDIPTDW 
VLTGALPQGW VIVDPVTHQP IATPVHDLGE NTTYTLVIEV TDATTAGYGG VNSGDSASIG 
ADLTFNPRDW SDERWGDATP RDGEGGTTLT VAAVAQETVT DGELTTGNNI SETTETVVVS 
RTEDHPDITP EGSTGHALTL VADETAGVQL HGGKGDVDPS TPSGLSASVN AVLAGLGLSA 
ADALSATRGS VTFNLHSDGS GEAAGNQASP SAVSIAWDAA QAVPEGTVLR TTSGADISLV 
VDENDPHVLR GVFTEGGVQH TAFVVVIADA NLSGAGSATV TFVQYTPLAH GNTGNHDEGL 
DLPTFSFTVS DDEGDTASAT VQVTVRDDGP TANADNNTFD EATVTAIDGN VLTGESSHGT 
DSTPDASGTD GWAGTDGGTG SGAVTGFSVV VGSTTYSGLA LDTPVTILNP GTSVPAGTFT 
LHADGSYTFT RAPGQDIADS FTMKVNYTVK DGDGDTASST LTLKLNAAPT LQLSLTGDSQ 
VYEDAAHGAR VNPAGSTGGA DGWNASGDNS HDIATYTVNW SYAGGRATGG TFAAGSFAFD 
VTLKDGSAKF DADTTNNTTM ANTGDVTWAV PNGSGGWTAM TFNLTTADGR AALVAALNAD 
LAERYGSNAE GESYVRVSGV SADGKTLTFT VLDGCPLDNA LPVRVAAIDD RLGDNNENYS 
VQIGNIHPAE DTPSSMDVVI AGQRSQTTTV YDEGNAAEGD GFRVGLESPV PAQESDGTAQ 
LTVVLYEKDG DLYTLNEGPA QNITVSLKFG ATGDTAGADQ DYFTTTSYTL KPTDWTWNAT 
EGRWEAKVPV TLADDRLSEG SESFTVKLTG VSGHEAGLND AKTTATVTIT DDTAAGHEAK 
LDGPSLEYFG PETVVREPVA PGESAEFTGG VNTTGTVNTA GYTIILTEVA AQDVVVWLKL 
GSAGLGTDFR TGTGLHAASD VSGLPGYADR PEGADFYVIV KAGAASARFT VDILHDHDTA 
ADGHGVDAGT DTVSWTIVDM QGSEVRFTPG DSGSTSTETI ADDMRGPVVS ITELDATQNT 
ADGTTTIKVG LGNDADGHAT ANEDVTVTLQ VVGSDGSVHE YTVTIPAGQD TGSLTLPIPH 
TDYYHVRVVG TDGGETRHDD GFRFVDVTGP GGGGGTDHGR VTLGLAAHDL PEGASHDGVN 
QAVYTVTGSL SDNYRPLLNG DVSFTLKTFD NSAHSPADYT ASNVTVTVDS GLMVLAKMSA 
TDSFSVDVLE DGTAVFTIPD LQFLGGTHAV SISFAPDGTA AIFVDGTAAD GLIATLIEDH 
LLHGAVTVTG PTPIVSVVDD HRVEGDETYS VVLSNLSGNA TVAGDGHGAM DSVTIIDNDA 
PTVLVTISDH TGAQTDTATE GQAHPLTVSV SLVDADGHPL ALGDGPVTFQ LTFSGTAEQG 
KDFAPYTTLV TIPDGGSAAS VQVSLPDDYI SDGNRTFVVT ATPVANDPYN GYPAGFIGSG 
SSAEVTIIDH VNGPDVTLTA STTSISENNG SASFGISMDK AVEEDATFTV RVDFGPGMTE 
ADLAGVKIGS GSVSTAGITK VLGADNVTVT GWEFQVTVPK GSAGGGAFSV VTRNDYETEG 
KETFTVSLVD SHGGEIGSLG AAHTVTVNDT LDGPQVYLDT KGGYGTAEEG GSAELHIGMT 
KTAVADFSVD LTVQTPELLV PGSTATLWIK TASGDWQAVD TAVAIGTDGS LRVTVPAGTV 
DAKVQFDLAG NDMVGDKHTF TVTLDGVADG ESAVRSVGSL TATFAEESHN AITYQFAGSA 
PDSNAVVTYT LKGVAFANVV SVTVDGQPVT ITKVGSQATF TVTGAAGAAI SDRITVTFKD 
ANAAADKAAL TIGSSVRLSA DIAVTDTTPG LMAAATLIAL TGDEAALATG VLHTSDLLAG 
VEDPSPHGAG IGFGANASAA DGMGHTGSGW TVDTASGELH YSLTGDGHYT YTAHDLGDAA 
DKVTATLTTH VQTGTVFDGS DDAHGIGLIV AGSAHGDTIT GSSGDDRIHG GAGNDHLYGG 
SGNDVLHGGD GNDVLHGGDG NDYLDGGAGV NTLYGDAGDD TLVVHDTGGG TGVADGYLDN 
HDFAGLHGGD GYDTLLVQGE DVTLDFSRIA ADTVTGIEAI DLTAHGAQHV TLSLDDLTSS 
DTGSLAVVFG ETPVLSASTA ASSEHAADGS VTFTAARGDS VTLTGLTSIQ IASIGDLTDT 
HDHQLLIHQV VSSTSGG