| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1159 |
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| Symbol | |
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| ID | 7173061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1424039 |
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| End bp | 1425439 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643539671 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002435581 |
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| Protein GI | 218886260 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.126981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACAC CCGCGGGCGC GACGCTTGGC CAGCGCCTGG CCGAGGCCGG TCGCACCAGC
GCGCTGGGCA ATGGCGGGGC GCACGGCGTG CGCCGTGATG ACCTGGAGTT CATGAGCGAG
GTGGACGCGG CCCTGCACCG CAAGGGGCAT CCGCTGGCCT TCCTGCTGTC CGCCTCGCTG
GGCGCCTTCC TGCTGGTGTT CATCGTCTGG GCGGCTTTTG CCTCGCTGGA TGAGGTGACG
CGCGGCCAAG CCCAGGTCAT CCCTTCGCAG CGCATCCAGG AGATCCAGAA CCTGGAAGGC
GGCATCATCA GCGAAATATT CGTGCGCGAA GGGCAGATCG TGGAAAAGGG CACCGTGCTG
GTGCGCCTGG ACAACGAATC GGCGGCCAGC TTCTTCCGCG ACGCGGTGTC CAAGTCGTAC
GAGCATATGG CCGCCATCGC CCGTCTGGAG GGAGAGATGG CGGGCAAGGA TCCGGTGTAC
CCGCCCGAAG TGGTGCAGAA GGCCCCGCAG GTGGTGGCCG ACCAGACATC CATCCACAAC
GCCCGCAAGC GCCAGTTGGA ACTGGAACTG AGCGTGCTGG AAAGCCAGCT TTCGCAAAAG
CGCCAGGAAG TGGACGAAAT GGTGGGGAGG CAGGGCCAGT TGGGCGCCAG CCTGCGCGTG
GCGCAGGAAC AGCGCGACAT CGCCCGGCCC CTGGTGGAAA AGCAGATATA CTCCAAGGTG
GACTACCTGA GCCTTGAGCA GCGCGTCATC CAGTTGCGCG GCGACATCAG TTCGCTGGCC
GTGAACATCC CCAAGGCGCG CAGCGCCGTG CATGAAGTGG AGCAGCGGTT GTCGCACCGC
AAGGCCGAGG TGCGCTCGCA GGCGGTGGAA GAAATCAACA AGCGCCGCGT GGAACTGAAT
TCGCTGCGCG AAACCCTGTC CGCCGGCGAA GACCGGGTGA CCCGTACAGA CCTGCGCGCC
CCGGTGCGCG GCACGGTGAA GCGGATCATC ATCAATACCC AGGGCGGGGT GGTGAAACCG
GGCGAATCCA TCCTGGAGCT GGTGCCGCTG GACGACACGC TGCTGGTGGA GGCGCGCATC
CGCCCGGCGG ACATCGCCTT CCTGCATCCG GGCCAGAAGG CCATCGTCAA GGTCACCGCC
TACGACTTCT CTATCTACGG CGGCCTGGAG GCGGGGCTGG AACAGATCAG CGCAGACACC
ATAGAGGATC GCAAGGGCGA GTTCTACTAT CTGGTCAAGC TGCGCACCAA GAAGAACGCC
ATCACCTATC GCGGCGAAAA CCTGCCCATC ATGCCGGGCA TGACCGCCAC GGTGGACATT
CTTACAGGCA AGAAGACGGT GCTTGACTAT CTGCTGAAGC CCATCCTGAA GGCGCAGCAG
AATGCCCTGC GGGAGCGTTG A
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| Protein sequence | MGTPAGATLG QRLAEAGRTS ALGNGGAHGV RRDDLEFMSE VDAALHRKGH PLAFLLSASL
GAFLLVFIVW AAFASLDEVT RGQAQVIPSQ RIQEIQNLEG GIISEIFVRE GQIVEKGTVL
VRLDNESAAS FFRDAVSKSY EHMAAIARLE GEMAGKDPVY PPEVVQKAPQ VVADQTSIHN
ARKRQLELEL SVLESQLSQK RQEVDEMVGR QGQLGASLRV AQEQRDIARP LVEKQIYSKV
DYLSLEQRVI QLRGDISSLA VNIPKARSAV HEVEQRLSHR KAEVRSQAVE EINKRRVELN
SLRETLSAGE DRVTRTDLRA PVRGTVKRII INTQGGVVKP GESILELVPL DDTLLVEARI
RPADIAFLHP GQKAIVKVTA YDFSIYGGLE AGLEQISADT IEDRKGEFYY LVKLRTKKNA
ITYRGENLPI MPGMTATVDI LTGKKTVLDY LLKPILKAQQ NALRER
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