Gene DvMF_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1150 
Symbol 
ID7173051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp1411052 
End bp1411489 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content71% 
IMG OID643539661 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002435572 
Protein GI218886251 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value0.675038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC AACTGCGGGC GCTGACCGCG CAGCGCAAGC GCGCCCATTC CCGGCTTGCG 
GCAACGGGCG CCCCCGTGTA CGCCGCCTTT CTGGACATGG AGCGGGCCGC CTACGCGGAC 
GGCGCGCTGC CGAAACGCCA CAAGGAACTG ATTGCCGTGG GAATTTCCGT GGTTCTGGAT 
TGCCGCTCGT GCATGCAGTG GCACATCGAA CAGGCGGCTG CCGCCGGGGC CAGCCCCGCC 
GAGGTGCTGG AAGCGGTGGA GGTGGGCATC GAGATGGGCG GCGGACCGGC CACCGTGTCG 
GCCCGCTTTG CGCTGGAGGT CATGGACGAG GTGTTCGGGG CGCGGTGGAC GGACGACGTG 
AAGGCGGACA TGGCCACGCG CCGGAGAGCC GCCGTGGCTG CGGGGCGATC CGCCTCCGAG 
GGCGGGGGCG TGGCATGA
 
Protein sequence
MNDQLRALTA QRKRAHSRLA ATGAPVYAAF LDMERAAYAD GALPKRHKEL IAVGISVVLD 
CRSCMQWHIE QAAAAGASPA EVLEAVEVGI EMGGGPATVS ARFALEVMDE VFGARWTDDV 
KADMATRRRA AVAAGRSASE GGGVA