Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1141 |
Symbol | |
ID | 7173042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1398572 |
End bp | 1401739 |
Gene Length | 3168 bp |
Protein Length | 1055 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643539652 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002435563 |
Protein GI | 218886242 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGATG CAAACGACGC GGGCAGCCGT GAATGTCCGG AAGACGCGGA GTCGTCGGAA CTGCTCTGCC GCAAGAATCG GCAGGCCGAT CCGGCATATC CGGAATATCC GGCTTATCCG GCTTATCCGG CAGACCCGGC CGATCCGGAC GTGCCAGCCA GCCCGGGCGG GCAATCAGCC GGTCCGGCGG AACAGTTGCG GCGCGATGCC GAACTGTTTC GCGGCGTATT CCGCAACATG AACGCGGGCG TGATGGTGTT GCGCCCCGTG CGCGCCCATG GGGACGACTG CGCCGACTTC ACCCTGCTGG ACATCAACCC GGCGGGCGAA CGGCTGAGCC GTCTGACCCG GGCGGAATCT ACCGGCAGCC TGCTGTCCGG CCTGCTGCCC GTCCCGGTGG CCGCCACCCT GCGTCAGGCC CTGGCCCGTG CGTGGCGCAG CGGCATTGCC GAGCATCTTC CCTCCTTCCT CTACAGCGAC AAGATACGCG GCTGCTGGCG CCACTACTTC ATCAGCCGCG CCGATTCGGG CGACCTGCTG CTGATCTACG AGGACGTCAC CGAACGTTAC ATGGCCCTGG CCAACTTGGC CGCCGGAGAG GAAAAGTATC GCGCCCTGGT GGAAAACACC CCGGACATCG TCATGCGCTT TGGCGGCGAC CTGCGCCTTA GCTACGTCAA CGCCGCCGTC GTTCCCTATC TGGGACCGCC GGAAGCGCTG ATGGGGCGCG GGGTGGCGGA ACTGGGCCTT GCCCCGCAGG TGGCGGATTT CTGGGCGCGC CAGTTGCGCG GGGTGCTGGA ATCGGGCCGT CCGGTGCAGA CCGACTACGT GTTTCACGGT CCTGCCGGGC GGGTGCTGTT CGACTGGCGG CTGGTGCCCG AGCGCGGTGT GGACGGGGGC GTATCCTCCG TGCTCAGCCT GCTGCGCGAC GTGACCCGCC AGCGTTCCAC GGAGCATGAT TTCCGCACCC TGTTCCGCAA GCTGATCACC AGTTTCGCCG TGCACGAGGT GCTGCTGGAT GCCGGGGGGC GGCCCGTGGA TTTCCGGTTT CTGACGGTGA ATCCGGCCTT CGAGGCCATG GCTGGCCGCC GGGCGGAAGA CGTGCTGGGA CGCACGGCCA GCGAGGTGTT CGGCCCGCAG GACTCGGCAT GGATCGCCGT GCTGGGCCGG GTGGCCCTGA CCGGTGAGCC GCTGCACACG GAACGCTATT CCCGCAACAT GGGAAAATGG CTGGAGATGA CCGTGTACCG GGTGCGCGAA CGCCAGTTCG CCATCATTGC CGCGGACATC ACCGAACGCC GCAACGCCCG GCGCGAACGC AGGCTGAGCG CGGCGCGGCT GTCAGCCCTG CACCGCCTGT CGCGCATGGA CGCGGCGCCC GAACGGTCGA TCATGCGCTT TGCGCTGGAA CAGGCAGTGC GCCTGACCGG CAGCGAGTTG GGGTATCTTG CCCTGGTGGA CGGCGGGCGG GTGCCTGCGG ACGGCGTGCT GTGGTCGCAT CTGGTGATGG AGCCGGGCCG GCTGGCAGCG CCTTCCGGCG CCTTGCCGGA GGCCGGGAAA GACTGCGGGG CAGACGGCAG GGCAACCGTG GCGGGGCCGT GGTCCGAGGT GGTGCGTTCC GGCCAGCCGG AAATCCGCAA CGGAGCCTCC GCCGGGGGGG CGGGCGCGTC TGGCCTGCCG GGCGAGCCGG GCGATTCGGG CGCGGAACCG GCCCACCGCG TGGGCGGCAT GTCGTTGTGG CGCCACCTGG CCGTGCCCGT GCTGGAAGAG GGGCGGCTGG TGGCCGTGGC GGGCGTGGCC AACAAGGATC TGCCCTACGA ACGGGCCGAC CGCCGCCAGC TTGAGCTGTT CATGCACGGC ATGTGGGAAC ACATCGCGCG GCGGCGGGCC ATGGTCTCGT TGCGGCGCGC CAAGGACGCC GCCGAGGCGG CCAACCGCTC CAAGGACGAA TTTCTGGCCA ACATGAGCCA CGAACTGCGC ACGCCGCTCA ACGGAGTGCT GGGCATGCTG CAACTGCTGG ACGGTCCGGA CCTGAGCGAC GAGCGGCGCG GCTACCTGCG CACGGCGGTG GAATCCGGCC ATGCCCTGCT GCGCATCATC GACGACCTGC TGGACATTTC CGCGCTGGGG GCGGGCGGAT CGGGCCTGCG CGACGAGCCG TTCGACCCGG CGGCGGTACT GCGCCAGGTG GCCGAAATGG TGGACCCGGC AGCGCGGCGG CGCGGGCTGG CGCTGGGGCT CATCGCCGAT GCGCTGCCCC TGCGGGTGCG CGGCGATGCG GCGCGGCTGC GCCAGGTGCT GTACAATCTG GTGGCCAACG GGGTGAAGTT CACGCATCAG GGCGGCGTGG ACATCCTGGC CTGCCCCGTG GGCGGCGACA GGCTGCTGTT CACCGTGCGC GACACGGGCA TCGGCATTCC GGAAGAAAAG CTGCCCGTGG TCTGCGAACC CTTCGCGCAG GTGGATGGTT CGTCCACCCG GCGCTACCAG GGGGCCGGGC TGGGCCTTGG CATCGTGCGC CGCCAGGTGG CGCGCATGGG CGGCACCATG ACCATGGAGA GCGAGGAAGG CGTGGGCACC TCCGTCCATG TCTGCCTGCC GTTGCCAGAG GTGGACGCCG CCAACGGAAC GAACGGAACG AACGGGGTGA ACGGGGCGGG CAGGGCAAAC GGCGTGAACG GCAGGGCGCA TGACGGTGCC CACCGCGCCG GTTTCGCATC CCCCGCATCT CCCGCATCTG CGGAATCCTG CGCGGAGTGC CGCGCGGTCA CGGAGGCGGC GGCCCGGGAA TTGCGGGCGT TGCGGGTGCT GGTGGCGGAA GACGACCTTA TCAACCGGCT TACGGTGCAA CGCATGCTGG AACGCGAAGG CCACCGGGCG GTGTGCGTGG AAAACGGGGC CGATGCGGTG CGCGCGGCGG GCGAGGCGGA CTACGACATC ATCCTCATGG ACATCCAGAT GCCCGGCATG GACGGCACAG AGGCCGCCCG GCGCATCAAC GACCTTGCGC GCAGCACGGG CCGGACCCGT CCGCCCATCG TGGCCCTGAC CGCCCATGCC CTGCGCGGCG ACCGCGAACG GTTCCTGGAG TCGGGCATGG ACGACTACAT CGCCAAGCCC CTGGAGCGCG ACGTGTTGCG CCGGGTATTG CAACGGCTGT CGAACTGA
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Protein sequence | MQDANDAGSR ECPEDAESSE LLCRKNRQAD PAYPEYPAYP AYPADPADPD VPASPGGQSA GPAEQLRRDA ELFRGVFRNM NAGVMVLRPV RAHGDDCADF TLLDINPAGE RLSRLTRAES TGSLLSGLLP VPVAATLRQA LARAWRSGIA EHLPSFLYSD KIRGCWRHYF ISRADSGDLL LIYEDVTERY MALANLAAGE EKYRALVENT PDIVMRFGGD LRLSYVNAAV VPYLGPPEAL MGRGVAELGL APQVADFWAR QLRGVLESGR PVQTDYVFHG PAGRVLFDWR LVPERGVDGG VSSVLSLLRD VTRQRSTEHD FRTLFRKLIT SFAVHEVLLD AGGRPVDFRF LTVNPAFEAM AGRRAEDVLG RTASEVFGPQ DSAWIAVLGR VALTGEPLHT ERYSRNMGKW LEMTVYRVRE RQFAIIAADI TERRNARRER RLSAARLSAL HRLSRMDAAP ERSIMRFALE QAVRLTGSEL GYLALVDGGR VPADGVLWSH LVMEPGRLAA PSGALPEAGK DCGADGRATV AGPWSEVVRS GQPEIRNGAS AGGAGASGLP GEPGDSGAEP AHRVGGMSLW RHLAVPVLEE GRLVAVAGVA NKDLPYERAD RRQLELFMHG MWEHIARRRA MVSLRRAKDA AEAANRSKDE FLANMSHELR TPLNGVLGML QLLDGPDLSD ERRGYLRTAV ESGHALLRII DDLLDISALG AGGSGLRDEP FDPAAVLRQV AEMVDPAARR RGLALGLIAD ALPLRVRGDA ARLRQVLYNL VANGVKFTHQ GGVDILACPV GGDRLLFTVR DTGIGIPEEK LPVVCEPFAQ VDGSSTRRYQ GAGLGLGIVR RQVARMGGTM TMESEEGVGT SVHVCLPLPE VDAANGTNGT NGVNGAGRAN GVNGRAHDGA HRAGFASPAS PASAESCAEC RAVTEAAARE LRALRVLVAE DDLINRLTVQ RMLEREGHRA VCVENGADAV RAAGEADYDI ILMDIQMPGM DGTEAARRIN DLARSTGRTR PPIVALTAHA LRGDRERFLE SGMDDYIAKP LERDVLRRVL QRLSN
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