| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1134 |
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| Symbol | |
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| ID | 7173035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1391367 |
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| End bp | 1393082 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643539645 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_002435556 |
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| Protein GI | 218886235 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 88 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGTG ATTGGATATT CCGCCCGGAA CCCGTGGCGG CCTCTCCTCC TTTTGCCGCA
TGGGCAGAGC GGCTGGAAGT ATCGGAACTT ATCGTGCGGC TGCTGTGGCG GCGCGGGGTG
GGGTCCGTGG ACGACATGGC CCTGTACCTT TCGCCCAACC TGCGGCATCT GGCCCCGCTG
GCCGAATGGC CGGGGCTGGA GCAGGCGGCC AGCACCCTGG CGGACGGCCT GCTGGCCGGG
CTGCCCTTTG CCGTGTGGGG TGACTATGAC GTGGACGGGG TGACCTCCAC GGCGCTGGTC
AAGGGCGTGC TGGCGCAGCA TGGCATGGCG GCGGCGCATC ACATCCCGGA CCGGCGCGAG
GAAGGCTACG GCCTGAACGT GGCGTGGGTG GAGCGGCTGG CGGAGCAGGG CGTGCGTCTG
CTGCTGACCG TGGACTGCGG CATCTCGGAC GTGGAGCCGG TGCGCCGGGC GCGCGAACTG
GGCATGACGG TGGTGGTGTC CGACCACCAC ATGCCGCCCG AGGGGCTGCC CGATGCCAAC
GCCATCTGCA ATCCGCGCCT GGCGGAATGC CCGTGCCCGG CCCTGGCCGG GGTGGGGGTT
AGCTTTCTGG TCATGGCGGC GGTGAACGCG GCCCTGGCCG AGCGCACCGG CAAGAAGGCC
GACATGCGCG ACTTTCTCGA TCTGGTGGCG CTGGGCACGC TGGCCGACGT GGTGAACCTG
CACGGGCAGA ACCGCATCCT GGTCAAGAAC GGCCTGCTGA AAATAGCGGA GGCCCGGCGC
CCCGGCATGG CCGCGCTGAA GACCGTGAGC GGGTATAATC CCACTGCGGC CATCGGCGCG
GGGCAGGTGG TGTTCGGCCT TGCGCCGCGC ATCAACGCGG CGGGGCGCAT GGGCAAGGCG
GAACTGGCCC TGCAACTGCT GCTGACCGAC GACCACGCCG AGGCAGCCCG GCTGGCCCAG
GAACTGGACG CGGAAAACGC CCGCCGCCGG GCCGAGGAAG ACCGCATCCT CGACGCCGCG
AAAAAGCAGG CCGAAGGGCA GCTGGACCGC ATGGGCCTTG TGCTGCACGG CGATGACTGG
CACCCCGGGG TCATCGGCAT CGTGGCCTCG CGCATCGTGG ACGAATTCTA CAGGCCCACG
CTGATCCTGA GCAGCGACGG CCAATCCATG AAGGGTTCGG GCCGTTCGGT GGCGGAATTC
GACCTGCACG CCGGGCTGAC CCGCTGCGCC GACCTGTTCA CCGCGTTCGG GGGGCACCAT
CAGGCGGCGG GCATGAGCAT GCCTGCCAGC CATGTGGATA CCCTGCGCGA ACGCTTCGAC
GCCGTGGTGC GGGCGGAACT GGGCGACACC CCCCTGACCC CGCGCCTGAA GCTGGATGGC
GAGTTGGGCT TTGCGCTGGC AGGCGATTTC ACCCTGCTGA AGGAACTCGA AATGCTCCAG
CCGTTCGGCA CGGGCAACGC CGAGCCGGTG TTTGCCTCGC CCCCGGTGCT GGTGCGCGAC
CTGCGCCGCT TCGGACCCAC GCGCGACCAC GTGGAACTGC AACTGACCGA CGAGAGTTGC
GGCATCACCT TGCGGGCCAA GGCATGGCGC CAGTCCGGCC AGTTTCCGGA CAGCCTGCGC
GGCACGCGGG TGCGCCTGGC CTATACCCCG CGCATCGACC GCTACAACGG TGCGGCATCG
GTGGATTTGC GCATCAAGGA CTGGAAGCGC GAGTAA
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| Protein sequence | MTRDWIFRPE PVAASPPFAA WAERLEVSEL IVRLLWRRGV GSVDDMALYL SPNLRHLAPL
AEWPGLEQAA STLADGLLAG LPFAVWGDYD VDGVTSTALV KGVLAQHGMA AAHHIPDRRE
EGYGLNVAWV ERLAEQGVRL LLTVDCGISD VEPVRRAREL GMTVVVSDHH MPPEGLPDAN
AICNPRLAEC PCPALAGVGV SFLVMAAVNA ALAERTGKKA DMRDFLDLVA LGTLADVVNL
HGQNRILVKN GLLKIAEARR PGMAALKTVS GYNPTAAIGA GQVVFGLAPR INAAGRMGKA
ELALQLLLTD DHAEAARLAQ ELDAENARRR AEEDRILDAA KKQAEGQLDR MGLVLHGDDW
HPGVIGIVAS RIVDEFYRPT LILSSDGQSM KGSGRSVAEF DLHAGLTRCA DLFTAFGGHH
QAAGMSMPAS HVDTLRERFD AVVRAELGDT PLTPRLKLDG ELGFALAGDF TLLKELEMLQ
PFGTGNAEPV FASPPVLVRD LRRFGPTRDH VELQLTDESC GITLRAKAWR QSGQFPDSLR
GTRVRLAYTP RIDRYNGAAS VDLRIKDWKR E
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