Gene DvMF_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1109 
Symbol 
ID7173010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1358820 
End bp1360046 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content64% 
IMG OID643539620 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_002435531 
Protein GI218886210 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.40784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGTG TTTTTCGTGA CTGGTATCCC TTCCTGCTGG CCATACTGGC CACGCTGCCG 
GGCCTTGCCA TGCGGGCCCT GCACCCCGAT ATCAGCCCTC TGGTCATGGC CGGTCTGACC
GGCGGGGCCA TTCTGGCGGC GTCGTTCATG CTGATGTGGG CGTGCGAAGT TGCCCAGCTG
GACATCCCCC AGACGCTGGC GCTGGCTGTG GTGGCGCTCA TCGCCGTGCT GCCGGAATAC
GCCGTGGACA TGTACTTTAC CTGGATGGCC GGGCAGCACC CCGAAAGCGA CTATGCCCAT
TATGCCATCG CCAACATGAC CGGGGCCAAC CGCCTGCTCA TCGGCGTGGG CTGGAGCGCC
ATCGTGCTGG TGTGCTGGAT GCGCTTTCGC AGCGCGGTGG TGGTGGAAAC CGAACGCCGC
ACCGACCTGG TGTTCCTGGC CATGGCCACG GCCTATGCGT TCTTCATCCC CATCAAGGGG
TCGCTGGCGT GGTACGATGG CGTGATTCTG GTTTCCATAT ACGCCTGGTA CATCTGGATC
GTTTCGCGCA GGCCCTGCAC CGAATTCGAG GCAGAAGGCC CGGCAGAAAC GCTGGCCAAA
CTGTCCAGGG GGCGTCGCCG TCTGGCCACC CTGTCGCTGT TCCTGTACGC CGCCGTGGTG
ATCCTGGCCG ACGCGGAACT GTTCAGCGAA AGCCTGGTGG CTTCCGGCAA GGTGCTGGGC
ATCAACGAGT TCCTGCTGGT GCAGTGGCTT GCGCCCATCG CCTCCGAGGC GCCCGAGTTC
ATCGTGTCGC TGATGTTCGC CTTGCGCGGG CATGCCAGCA TCGCGCTGGG CAGCCTGATT
TCGTCCAAGC TGAACCAGTG GACCCTGCTG GTGGGCATGA TTCCCGGCGT GTACGCGGCC
TCATCCGGCT CCATGCACCC GCCCATTCCC ATGGATTCGC ACCAGATGAA CGAAATACTG
CTCACTGCGG CGCAGTCGCT GTTCGCCATC TGCCTGCTGC TGCGCATGCG CATCGGCATG
CGCGGGGCGC TAGTGCTGTT CGGCCTGTTC CTGGCGCAGT TCATCTCGCC GTTCATCCAG
GCGCCGATAG AGGCGGCCAT GGGCCTGCCG CACATTCCCG ACCGGCTGCA CATCTGGTTC
AGCCTGGTGT ACGTGGTGCT GGCGGGCGGC ATGCTGCTGC TGCGCCCGCG CAGCCTGCTG
GACCTGCGCT ACGGCTTTCG CGTGTAG
 
Protein sequence
MKSVFRDWYP FLLAILATLP GLAMRALHPD ISPLVMAGLT GGAILAASFM LMWACEVAQL 
DIPQTLALAV VALIAVLPEY AVDMYFTWMA GQHPESDYAH YAIANMTGAN RLLIGVGWSA
IVLVCWMRFR SAVVVETERR TDLVFLAMAT AYAFFIPIKG SLAWYDGVIL VSIYAWYIWI
VSRRPCTEFE AEGPAETLAK LSRGRRRLAT LSLFLYAAVV ILADAELFSE SLVASGKVLG
INEFLLVQWL APIASEAPEF IVSLMFALRG HASIALGSLI SSKLNQWTLL VGMIPGVYAA
SSGSMHPPIP MDSHQMNEIL LTAAQSLFAI CLLLRMRIGM RGALVLFGLF LAQFISPFIQ
APIEAAMGLP HIPDRLHIWF SLVYVVLAGG MLLLRPRSLL DLRYGFRV