| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1100 |
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| Symbol | |
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| ID | 7173001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1347141 |
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| End bp | 1348472 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643539611 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002435522 |
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| Protein GI | 218886201 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A)
[TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.0175972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCACAC GGCGATACGG CATGAACAGC AAAAAGCGCA TCCTCGGCAT ACTGCTTGGC
GTCATGGTTC TGGCGGCGGG CATCTGGTAC TGGCATGGCC TCGGCAAGGT GGAAACCGAC
GACGCGCAGG TAGACGGGCG CATCTTCATG GTTTCGCCGC GCGTGGCGGG CTACGTGGTG
GATGTGCCCG TGGAGGACAA CCAGTTCGTC AAGGAAGGCG AGGTGCTGGC CCGGCTGGAC
CCCACCGAAT ACGAGGTGGC CGTGGCCGAG GCGCGCGCCC AGCTTGCCGC GTTGCAGCGG
GGCGTGCCGC TGGAGCTTTC GCAGACCGTG CACCGGGTGA CCGGCGCCCA GGCCGTGGAA
GAGGCCACCA AGCGTCGCGC CGCCCAGGCC CGCGACGAAG AGGACGCCGC CCGCTACGAA
ATGGAGCGCC TGTCCACGGA GCAGGCACAG GCCGCCCTGG ACCGGCGCCG CCTGGAGTCG
CTGGTGGGGC AGGGGGCCGT TTCGAGAGAG GCGGCGGACC GCGCCCGTTC CACCGACGAT
GCCGCCAAGG CCCGGCTGGA ATCGTCCCGC GCCAAGCTGG AAGCCGCCAG CAAGGCCCGC
GCTGCGGCAG AGGCCGAAAT GCGCCGCGTG CGCGCCGAGG TGGACCTGGC CGGAACCGGG
CAGGTGGTGG CGGAAATCCG CGCCCGCCAG GTGGAGGCCC AGCAGGCCAA GGTGCGCCAG
GCCGAGCTGA ATCTGGAATG GACCACCGTG CGCGCCCCCG TGGACGGCTA CGTGACCAAG
AAGAACGTGG AGCCGGGCCG CATGGTCACG CGCGGCCAGC CGATCATGGC CGTGGTGCCC
ATGTCGCCCG ACCACCTGTG GGTGACGGCC AACTTCAAGG AAACCGAACT TACCGACGTG
AAGCCCGGCC AGCCGTGCGA AATCCGGGTG GATACCTATC CCAACCTGGT GCTGAAGGGC
CTGGTGGAAT CGATCATGGC GGGCACCGGC GCGGCCTTTT CGCTGTTTCC GCCCCAGAAT
GCCTCGGGCA ACTTCGTGAA GGTGGTGCAG CGCATACCCG TGCGGTTGCG CCTGACCGAC
TATGACCCCG CCACCATGCC GCCCCTGCGC GTGGGCATGA GCGTGGTGCC GGTGATCTTT
ACCGGCAGGG GCGTTTCCGA GGTGCCCCCG CGCGCCGTGG GACCGGATGG TGCCGCCGTG
CGCGGTGAAG GGGCTGGCGC CAGTGCCGGG CAGGCGGCTA AGCCCGCCGC CAACGGTACG
GGTTCCGCTT CGGGCGTGGC GCCGGGCATG GCCAACGCCA CCGCACCCGC CCTGTCGGCC
CCCAGGCAGT AG
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| Protein sequence | MPTRRYGMNS KKRILGILLG VMVLAAGIWY WHGLGKVETD DAQVDGRIFM VSPRVAGYVV
DVPVEDNQFV KEGEVLARLD PTEYEVAVAE ARAQLAALQR GVPLELSQTV HRVTGAQAVE
EATKRRAAQA RDEEDAARYE MERLSTEQAQ AALDRRRLES LVGQGAVSRE AADRARSTDD
AAKARLESSR AKLEAASKAR AAAEAEMRRV RAEVDLAGTG QVVAEIRARQ VEAQQAKVRQ
AELNLEWTTV RAPVDGYVTK KNVEPGRMVT RGQPIMAVVP MSPDHLWVTA NFKETELTDV
KPGQPCEIRV DTYPNLVLKG LVESIMAGTG AAFSLFPPQN ASGNFVKVVQ RIPVRLRLTD
YDPATMPPLR VGMSVVPVIF TGRGVSEVPP RAVGPDGAAV RGEGAGASAG QAAKPAANGT
GSASGVAPGM ANATAPALSA PRQ
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