| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1089 |
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| Symbol | |
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| ID | 7172990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1329166 |
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| End bp | 1331772 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643539600 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002435511 |
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| Protein GI | 218886190 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 0.371238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCTG CCGCCCGCCG TGCCCGGAAA TGGTTGCGGA TGATATCCAC CTGCCGCCCC
GTCCATGCGT CAACCCGCCA GCCTGGCCGT CAGTCTGTCC ACCTGTCCGG CTGCCTGCCC
GTGTTCCTGA CCGTCTGCCT GACCGCCTGC CTGACCGCCT GCCTGACCGT GCTCATGACG
GCACACGCCG CCCATGCCAC CGGCCCGGAA CCTGCAATGC ATCAGCCCCA GGCCGTGTCC
CAAATCGTCC CTCAAACCAT ACCCCGGCCA GGCGCACCCG CGGGAGGGCC GACAGAAGCA
CCGGGTACCG CCAACGCCAC GCCAGAGGCC GTGGCCCAAT CGGTGGCTGA TTCCAAGGTC
CAGACCCTGG CCAACGCCAT CGCCGCACGC GGGGTGCAGG ACGGACGCCA CCTGGTGCTG
CTGCTGCATT CCTACGAGCA GGGCATGGGC CGGGTGCGCG AGCTCACCGA CACGGTGGAG
CGCATGCTTG CCCCCGTGGA CAACCATATC GCGCTGCGCG TGGAAAACCT TGATTCCAAG
CGCGTGCACA CCCCGGAATA CCTCGACGCC TTTGCCGCCC TGCTGGCCCT GAAATACGCT
AGGCGTCCCC CCACCCTGAT CCTGACCAGC GACGACGACG CCCTCGACTT TCTGGAAACG
CACCACGCCG CGCTGTTCCC CGGTGTGCCC GTGCTGTTCT GCGGGGTGAA CCATTTCCAG
GACGGCCTGG CGACCAGCAT TCCCCGGCTT TCGGGCGTGC TGAGCACCTT TTCCGCCCGC
GAAACGGCAC TGACCATGCT GGATATGCAC CCCGGCACCC GGCAGATATA TCTCGTCAAC
GACCACACCG AAATCGGACA GGCCGTGGCC CGCGACGTAC GGGGACAACT CGCGAACCTG
CCCGGCGGCG TGCAGGTGCA CGAATTTCCG CCCCTGCCCT TCGACGACCT GCTGTCCCGG
CTGGCCACCC TGCCGCCGGA CGCCGCAGTG CTGCTGGGCG TGTATTTTGT CGACAGCGTG
GGCTACGCCA CCACTTTCGA GGATATGGGG GCGCGCATCT CCGCCGCCGC ACGGGTACCC
GTGCACTGCC TTGTGGACCT CAACCTGAAC GGCGCCGTGG TGGGCGGCAA GGTATCCGGG
GCGACCTTGC AGGCCGAAGC GTTGGGCCGC ATGGCCCTGC GGGTCATTTC CGGCACGCGC
GCCGAAGACA TTCCCATCCA GAAAGAAGGC GTGAACCGCT ACGTGTACCG CGCCCCCGCG
CTGGAGCGAT GGGGTATAGC CGAAGGCCGC CTGCCGTCGG GCAGCACAGT GATCGACCAT
CCCTTCTCGC TCTACCGAAC GTACCGTCCC CAGATCAACG TACTGATCCT GTTCGTGGTC
TCCCTGGCAT CCACCATTGC CGTGCTTGCC TACATGATGC GCCGCAGGGC CGCCTCCGAA
CGGCAACTGC GGCGGCTGCG CAACCTGCTG GCCAATACCC TTGATTCCAT GCCCTCGGCC
ATCGTCGGCG TGTCGCCCGA AGGGCTGGTC ACCCACTGGA ACCGCCGCGC GGCGGACGCC
ACCGGCCAGG AACCCCATGA AGCCGTGGGC CGCCCCCTGG GCGAGGTGTT CCCCCGGCTG
GAAAAGCTGA CGCCGCTCGT GTTCGAGGCG CTGAAGGACG GCCAGGTGCG TGACGGGCAG
CGCCTGCTGC GCCCCGATGG CGACATGGTG CGCTACGAGG ACGTGACGGT CTTTCCCCTG
GTGGCCAACG GCACGCAGGG TGCCGTCATC CGCGTGGACG ACGTGACCGA GCGCGAGCGC
ATCCGCGAAA TGATGATCCA GACGGAAAAG ATGCTGACCG TGGGCGGCCT TGCGGCGGGC
ATGGCGCACG AGATCAACAA CCCCCTCGGC GGCATCCTGC AGGCGGTGCA GAACATGCGC
CGCCGGGTGG AGACGGGGCG GCCCGTCAAC GACACCGCCG CCCGCGAGGC CGGGCTGACC
ATGGAACAGG TGCGCGGGTA TCTGGAACGG CGCGAGATAC TGCGCATGCT CGACGACATC
GCTGCTTCGG GCGCACGGGC TGCGCACATC GTGGCCAACA TGCTCGACTT CAGCCGCCGT
ACCGACGGCG AGTTCATGCC GCAGGACCTG CACCGGCTCA TCGAAAACAC CCTCGAACTG
GCCGCCAACG ATTACGACCT GAAGAAGCTC TACGACTTCC GCACACTGCG CGTCGTGCGC
CACTATTCCC CCATGCTGCC TCAGGTGCCC TGCCTGGCCA CAGAGGTGGA ACAGGTGCTG
CTGAACCTGT TCAAGAACGC CGCGCAGGCC CTGGCCGCCG GGCCGCCGCC CGATGGCGCG
CCGCCCACAC TGACCATCCG TACCGAGCGC CACCACGACC TCGTGGCGGT GACCGTCAGC
GACAACGGGC CGGGCATGAC ACCCGAGGTG CGCGCCCGGG TCTTCGATCC CTTCTACACC
ACCAAGCCCC CCGGCGAAGG CACCGGCCTG GGCCTGTCGG TGTCGTACTT CCTGATCACC
CACAATCACG GCGGCAGCTT TGCCCTGCAT TCCGAACCGG GCAAGGGGGC GCATTTCACG
TTCACCCTGC CCCTGCGGCA ACGCTAG
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| Protein sequence | MSAAARRARK WLRMISTCRP VHASTRQPGR QSVHLSGCLP VFLTVCLTAC LTACLTVLMT
AHAAHATGPE PAMHQPQAVS QIVPQTIPRP GAPAGGPTEA PGTANATPEA VAQSVADSKV
QTLANAIAAR GVQDGRHLVL LLHSYEQGMG RVRELTDTVE RMLAPVDNHI ALRVENLDSK
RVHTPEYLDA FAALLALKYA RRPPTLILTS DDDALDFLET HHAALFPGVP VLFCGVNHFQ
DGLATSIPRL SGVLSTFSAR ETALTMLDMH PGTRQIYLVN DHTEIGQAVA RDVRGQLANL
PGGVQVHEFP PLPFDDLLSR LATLPPDAAV LLGVYFVDSV GYATTFEDMG ARISAAARVP
VHCLVDLNLN GAVVGGKVSG ATLQAEALGR MALRVISGTR AEDIPIQKEG VNRYVYRAPA
LERWGIAEGR LPSGSTVIDH PFSLYRTYRP QINVLILFVV SLASTIAVLA YMMRRRAASE
RQLRRLRNLL ANTLDSMPSA IVGVSPEGLV THWNRRAADA TGQEPHEAVG RPLGEVFPRL
EKLTPLVFEA LKDGQVRDGQ RLLRPDGDMV RYEDVTVFPL VANGTQGAVI RVDDVTERER
IREMMIQTEK MLTVGGLAAG MAHEINNPLG GILQAVQNMR RRVETGRPVN DTAAREAGLT
MEQVRGYLER REILRMLDDI AASGARAAHI VANMLDFSRR TDGEFMPQDL HRLIENTLEL
AANDYDLKKL YDFRTLRVVR HYSPMLPQVP CLATEVEQVL LNLFKNAAQA LAAGPPPDGA
PPTLTIRTER HHDLVAVTVS DNGPGMTPEV RARVFDPFYT TKPPGEGTGL GLSVSYFLIT
HNHGGSFALH SEPGKGAHFT FTLPLRQR
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