| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1088 |
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| Symbol | |
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| ID | 7172989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1326701 |
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| End bp | 1329169 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539599 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_002435510 |
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| Protein GI | 218886189 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.436726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTT CGCGCCACGC TCAGCCCGGG CGTTTCCAAG CCCCCGCTTC CACCACCGGC
ACCGATGCAC CGCCGGGTTG CGAGGGCGAC CACGATCCGG CATCGGCAGG CGCGGCGCCC
GTAACGGCAT CGGAAACGGC CCGCCCCGCA ACCCGAAAAT CCCGCCCCAC CGCGTTGCGC
TGGCTGCTCC CCACCCTGCT TTTGGGCGGT TGCGCCCTGC TGGGCGCCAT CACCTTCGCC
GATCCCTACG CGCTGCCCGC CACACCGCCG GTGCAGGCCC TGCTCATCAA CTCCTACGAC
CAGCGCATGC GCTGGGTGCG CGAACTTACC ACAGAGGTGG AAGCCGAACT GGCCCCACCG
GGCGGCAACG TGCTGTTGCG AGTGGAGAAC ATGGACTCCA AGACAGTGCA CGACGATGCC
TATTTCGCCG CCTACGCCGC CATGCTGCGC GCCAAGTACG CCACGGTGCG CCCGGCGCTG
CTGCTGTGCT CCGACGACCA TGCGCTGAAC TTCCTGCGCC GCTACCGCGA CACGCTCTTT
CCCGGCGTGC CCGTGGTGTT TGGCGGCGCC AACAACTTCA CCCCGGCGCG CGTACAGGGC
ATGTCCGGGG TCACTGGCGT CACCGAGGAG CACTACCCCT ACGAGACGGT GCAGTTCCTG
CTGCGCGCCC ACACCGGCGT GGAAGAAATC TTCGTCATCA ACGACTACAC CGAAAGCGGG
CGGTCCACGG CAGCGGAACT GGCAGAAGCG TTGCGCCCGC TGGAAGGGCG CGTTCGCCTG
CGCTGGAATT CCGACGTGCC GGAGGAAGAC CTGCTGCGCC AGGTGGCCGC GCTGGGGCCG
GAAACCGTCG TGCTGCTCGG CGTGTACTAT TCCGACGCAT CCGAGCGCAG CGTCACCTAC
GAAGAAGCGG GGCTGCGCAT CGCCGCGGCT GCCAGGGTAC CCGTGTACTG CATCATGGGC
TTCAACCTTG GCGGCAACAT GGTGGGCGGC AAGCTGGTCA CCGGCCAGTC GCAGGGGCAC
GTCATGGCCG AACTGGGGCG GCGCATCCTG GCGGGCGAAG ATCCCGCGTC CATCCCCGTC
CGGCGCGGGC CGGGAGAGTT CCTTTTCGAC TACGCACAGT TGCGACGCTG GCGCATCGGC
GAAGCAACGC TGCCCCCCGG CAGCGAGGTG GTGGAACGCC CCTTCTCCAT CTACCGCGCC
TACACGAGGG AAATCCACGT GGTGGCAACC TTCGTTGCCG CCATGCTCGT CACCATCGCC
GCCCTGATGG TGGTTATGCG GCACAAGGCG CGAACCGAGG CGGAACTGCG CAAGCTGCGC
AACCTGCTCG CCAACATCCT GGACTCCATG CCCTCGGTGA TGGTGGGCGT CTCGCCCGAA
GGACGCATCA TCCAGTGGAA CCGCCAGGCG GCCCTGCTGA CCGGCGTGGA ACCCACGGCA
GCACTGGGGC GCAGCCTGGA AAAGGTCTTT CCGCGCCTTG CCCCTCAACT GCCGCGCGTA
CGCGAGGCCC TTGACAGGCA GGCCCCCGTG CAGGGCGAAC GGCTGACCCG CACCGACAAC
GGCGTGCCCC GTTACGAGGA CGTTACCGTG TTCCCCCTGG CCGCCAACGG CGTGGAGGGG
GCGGTGATCC GCCTCGACGA CGTGACCGAG CGCGAGCGGG TGCGCGAAAC GATGATCCAG
ACCGAACGCA TGCTGTCGGT GGGCGGGCTG GCGGCAGGCA TGGCCCACGA GATCAACAAC
CCCCTCGGGG GCATCTTGCA GGCGGTGCAG AACGTGCTGC GCCGCATAGA GCCGGGGCGC
GCCGCCAACG ACGAGGCCGC CCGCGCCATG GGCTGCACCG TGGAGCAGGT GCGAGACTAC
CTGGAACGGC GCGGCGTGCT GCGCATGGCC GCCGGGGTGC GCGAGGCGGG GATGCGGGCC
GCCCGCATCG TGGCCAACAT GCTCAACTTC AGCCGCCGCA GCACCTCGTC GCACATGGAA
TGCGACATCG GGGCGCTGGT GGCCACCGCC GTGGACCTGG CCGCCAACGA CTACAGCTTT
CGCAACAACC ACGACTTCCG CAGGCTGCGG GTGGACATAC ACATCCCGCC CGACCTGCCC
CGCCCCGCCT GCCTGGCCAC CGAGGTGGAA CAGGTGCTGC TGAACCTGCT GCGTAACGCC
GCGCAGGCTT TGGCCGGTTT CATTCCACCG GACGGCGCCC CGCCCACCAT CACCATAGTG
GCTGAACACC GCCCGGAAGG GGTGGTCGTG TCCGTCGCGG ACAACGGCCC CGGCATGCCA
TCGGAGGTGC GCGCCAGGGT CTTCGACCCG TTCTACACCA CCCGCCCGCC CGGAGAAGGC
ACGGGACTCG GGCTCTCCGT GGCGTTCTTC ATCATCACCC AGAACCACAA GGGCACGTTC
ACCGTGGTTT CCGAACCCGG CCAGGGCGCC ACCTTCACCT TCACCCTGCC TTTGGGGCGC
GCGTCATGA
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| Protein sequence | MPASRHAQPG RFQAPASTTG TDAPPGCEGD HDPASAGAAP VTASETARPA TRKSRPTALR
WLLPTLLLGG CALLGAITFA DPYALPATPP VQALLINSYD QRMRWVRELT TEVEAELAPP
GGNVLLRVEN MDSKTVHDDA YFAAYAAMLR AKYATVRPAL LLCSDDHALN FLRRYRDTLF
PGVPVVFGGA NNFTPARVQG MSGVTGVTEE HYPYETVQFL LRAHTGVEEI FVINDYTESG
RSTAAELAEA LRPLEGRVRL RWNSDVPEED LLRQVAALGP ETVVLLGVYY SDASERSVTY
EEAGLRIAAA ARVPVYCIMG FNLGGNMVGG KLVTGQSQGH VMAELGRRIL AGEDPASIPV
RRGPGEFLFD YAQLRRWRIG EATLPPGSEV VERPFSIYRA YTREIHVVAT FVAAMLVTIA
ALMVVMRHKA RTEAELRKLR NLLANILDSM PSVMVGVSPE GRIIQWNRQA ALLTGVEPTA
ALGRSLEKVF PRLAPQLPRV REALDRQAPV QGERLTRTDN GVPRYEDVTV FPLAANGVEG
AVIRLDDVTE RERVRETMIQ TERMLSVGGL AAGMAHEINN PLGGILQAVQ NVLRRIEPGR
AANDEAARAM GCTVEQVRDY LERRGVLRMA AGVREAGMRA ARIVANMLNF SRRSTSSHME
CDIGALVATA VDLAANDYSF RNNHDFRRLR VDIHIPPDLP RPACLATEVE QVLLNLLRNA
AQALAGFIPP DGAPPTITIV AEHRPEGVVV SVADNGPGMP SEVRARVFDP FYTTRPPGEG
TGLGLSVAFF IITQNHKGTF TVVSEPGQGA TFTFTLPLGR AS
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