Gene DvMF_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1083 
Symbol 
ID7172984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp1322238 
End bp1322894 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID643539594 
ProductTPR repeat-containing protein 
Protein accessionYP_002435505 
Protein GI218886184 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value0.858271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCA CGTTGTTCCG CACCCCCATC ACCGCCGAAG CTTACGCCGC GCGCACCGCA 
ACCCCGGCCA GGACTTTTGG GCTGCGCGCG CTGCTTCTGC TGACGCTGCT GCTCGTGGCG 
TCCGCCCTGT CGGGCTGCGC CACGCAGGAG CCGCTGAAGC CCTACAACCC CATGGGTGTT 
TCCGGAAAGG TCAACCCGGA GGCGGAAAAG TACTTCGCCA TGGCCCATGT GCTGTGGAAG 
GGCGGCGAAA CCTGCACAGA ACCGGAAAAG GCCGTGGCCT ATCTGAACAA GGCCATCGAA 
ATCCAGCCCG ACTACTGGCA GGCCTTTGCC CGGCGCGGGC TTGCCTATAG CGAAATGGGC 
CTGTGGGACG AGGCGTTCGA TGACCTGACC CGCGCAGTGC GGCAGCATCC TTCGGCAGAA 
AACTACGCCT GGCGGGGGCT GGTGGCCTTT CGTATGGGCA ATCAACTGGG TGCCCGCAAG 
GATCTGACGC GGTCTCTCGA ACTGGATTCT TCCCAGCACC GGGCCTGGAA CTACCGGGCC 
GCCGTGGAAC TGGCGGAAGA CGAGATAGCC GCCGCCTGCG CGGACTTCGC CAAGGGCTGC 
TCCAACGGCG ACTGCACGGG CATGGAGTCC GCCAGGCGGC AGGGTGTCTG CAAGTAG
 
Protein sequence
MPFTLFRTPI TAEAYAARTA TPARTFGLRA LLLLTLLLVA SALSGCATQE PLKPYNPMGV 
SGKVNPEAEK YFAMAHVLWK GGETCTEPEK AVAYLNKAIE IQPDYWQAFA RRGLAYSEMG 
LWDEAFDDLT RAVRQHPSAE NYAWRGLVAF RMGNQLGARK DLTRSLELDS SQHRAWNYRA 
AVELAEDEIA AACADFAKGC SNGDCTGMES ARRQGVCK