Gene DvMF_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1080 
Symbol 
ID7172981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1319828 
End bp1320598 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID643539591 
Producthypothetical protein 
Protein accessionYP_002435502 
Protein GI218886181 
COG category[L] Replication, recombination and repair 
COG ID[COG3728] Phage terminase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCAGC GCCGCTTCGT GGAGGAATTC CTGGTGGACA TGTCGCCCGT GCGGGCCGCA 
GAACGGGCAG GGTATGCGCC GGTACGCGCC GCGCGCACGG CCTCGCGGCT GCTGTCCTCA
CCCGCCGTGC AGCAGGCGGT GGAACAGGCC ATGGGCCGCC GGTCCCTGCG CACCGGGGTG
ACCCAGGACC GGGTGGTGCG CGAACTGGCC GCCGTGGGAT TCGCGGTGAT GACCGATCTG
TGCCACTGGT CCGACGAGGG CGTGCGGCTG CGAGATTCCA CGGAACTGAC CCGCGCGCAG
GCCGCCGCCG TGGCCGAGGT GCGCGAGACG TCCACGGCAC GCGGCGCACG CGCCACGCGT
GCCACGCGTC CGGTGCCCGG CGCAACACAC GACACCGGCG AAGACAAGCC CGAAGCGCCG
GTGCGCGGCG GCGTGCAGGT GAAACTGCAT TCCAAGCTCA AGGCCCTGGA AATGCTGGGC
CGTCATCTCG GCATGTTCGG GGGCGCCTCG GCCACCGATG GCGATGCCGC CCCCGGTGAG
TTCGGTCAGG TCACGCCGCC CGAACTGCCG ACGGAACTGC GTGCCCGCAT CGACGCACTG
TACCCCCGCC ACGGGACCGC TGCCGTCTGC AGCCACGGAG GGGACTGCGG ACGGAGCGAC
GACGGCGCAG ATGATGGAGA CGACAGGGAC GGGGAGGATT GGGAGGATTG CGGGGATTGC
GGGAGCGGGG AGGACGATGG GCCCGACGGT GAAGGCTGGG AACCCGCATA G
 
Protein sequence
MRQRRFVEEF LVDMSPVRAA ERAGYAPVRA ARTASRLLSS PAVQQAVEQA MGRRSLRTGV 
TQDRVVRELA AVGFAVMTDL CHWSDEGVRL RDSTELTRAQ AAAVAEVRET STARGARATR
ATRPVPGATH DTGEDKPEAP VRGGVQVKLH SKLKALEMLG RHLGMFGGAS ATDGDAAPGE
FGQVTPPELP TELRARIDAL YPRHGTAAVC SHGGDCGRSD DGADDGDDRD GEDWEDCGDC
GSGEDDGPDG EGWEPA