Gene DvMF_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1060 
Symbol 
ID7172961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1300214 
End bp1302235 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content67% 
IMG OID643539571 
Productmethyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 
Protein accessionYP_002435482 
Protein GI218886161 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATAC GCCAGAAACT CATCTACGGC CTAGGCACGC TCACCCTGCT CAACCTGGTC 
ATGGGCGTGG CCATGGTGCT GGCTCTCGGC AACATCAACA TGCTGGTGGA CGAACTGGTC
TCCAAGCACG TGGAACTGGA AGAAACCGTG TACGCCATGC GCCACGACGT AAGCCAGCTG
CGCCGCTACG AAAAGGACAC CCTGCTCAAC ATCGCCAACG CGGAACGGCT GCGCGACTAC
CTGCCCCGGC ACGAAAAGGC CGCCACGGAC CTTGCCGCCC ACACCGACGC CGCCGAACGC
AAGTTGCGCA GCATACCGGA GCTGGCCAAC CTGCTGCAAC AGGTTGCCGC CATCCGTTCG
CTGAGCGGCC CGTATCTTTC GTCCTTTTCC GTGCTGACCC GCGAAGCCCC CGCCGCCGGC
CTCTCCGCCG AGCAGGCCAA CATCCGCTTC GATGCCGGAC GAGAACAGGC CCACAAGCTG
GAACAGTCCA TCGAGGAACT GACCAAGGCC ACCATAGAGG CAACCCGCGA GCACGCGGAT
GAAACAAACG ACACCGGTTC CATGCTGCGC ACCGGGGCCG CCGTGGCCTT CTCCTTGACA
GTGCTGCTGG GCGGCCTGCT GGCCGTGGGG CTGTACCGCA CCATTCAGGC CCCGTTGGCG
GCCCTGACCG ACTTTGGCAG ACGCATCGCG GATGGCGACT TCGAATACAA GAGCTCCTTC
CGCTTCACGG CGGAAATGGG CCAGCTGCAT GAAACCATCA CCCACATGGT GGACGCCATC
CGCGAACGGG TGGCCTACAA CCGGGCCATC ATCAACCGCG TGCCCGATCC CATCATCGTC
ACCGGGCCGC GCCGCAACAT CCGCGCCCTG AACAGCGCCG CCTGCGCCCT GCTGGGCCAT
GCGGAAGACG ACCTGATAGG CAAGCCGCTG GGTAGCTACC AGGGGGCGGA CGTGTACGGC
GCGGAGCCAC CCATCGACCG TCTGGCCCGC ACCAGCGAGG CCGAAACCCA ACTGGACTTC
ACCCGGCAGA CAGGCGGCGA GACGCGCTAC TTCCATTCCC GCGCGGCCAC GGTGCGCAAG
CCCGACGGCA CACTGGTGGG GTACATGGAA ATCCGCCAGG ACATCACCGC CGTGAAGCGC
GGCGAACTGG AAGCGCTGGA ACGCAGCGAA CGCATTGCCG GGGTGGCCCG CGATGCCGAC
GCCATTGCCA CCACCGTGGC CGATGCCGCC AGCCAGCTTT CCGACCGGGT GGGCGAGGCC
GCGCGCGGGG CCGACAGGCA GTTGCAGCGC AGTTCCGAAT CGGCCACGGC CATGGACGAA
ATGGCCGCCA CGGTACGCGA GGTGGCCCGC AACGCCTCGG ACACCAACCG CACCACGGCG
GAAATGTCCG AACGGGCCAG ACAGGGCGCG GACATCGTGG AAAAGGTGGC CGCCGCCATC
GAAGGGCTGG GCAGCCATTC GCGCGAACTG CGCAGCGAAA TGGAAAAACT GGGCACCCAG
GCCAGCGACA TCGGCAACGT GCTGGGCGTC ATCAGCGACA TTGCCGACCA GACCAACCTG
CTGGCGCTGA ACGCGGCCAT CGAGGCGGCT CGCGCCGGGG ATGCCGGGCG CGGCTTTGCC
GTGGTGGCCG ACGAGGTGCG CAAGCTGGCG GAAAAAACCA TGAACGCCAC CCGCGAGGTG
GAGGCGGCCA TCGGGGGCAT CCAGCAGTCG GCACGGCGCA GCGCGGAAGC CACCGACGTT
GCCGTGCGCG GCGTGACCGA CAGCCAGGCC CTGGCCAACG AGGCGGGCGG CATGCTGCAG
GAAATCGTGC ACGCGGTGCA GCAGGCATCC GACCAGGTGA ACTCCATCGC CACCGCCGCC
GAACAGCAGG CGGCCACCGG CGATGAACTG AACCGCATCA TTGCCGAGGT GAACGAAATA
TCCGGCTCCA CGGCCATGCG CATGTCCGAG GCGGAAACCG CCATCGCCGA GCTTTCGGCC
CAGGCCGCCG CCCTGCGGCG GCTGATGGAT TCCATGACGT AG
 
Protein sequence
MTIRQKLIYG LGTLTLLNLV MGVAMVLALG NINMLVDELV SKHVELEETV YAMRHDVSQL 
RRYEKDTLLN IANAERLRDY LPRHEKAATD LAAHTDAAER KLRSIPELAN LLQQVAAIRS
LSGPYLSSFS VLTREAPAAG LSAEQANIRF DAGREQAHKL EQSIEELTKA TIEATREHAD
ETNDTGSMLR TGAAVAFSLT VLLGGLLAVG LYRTIQAPLA ALTDFGRRIA DGDFEYKSSF
RFTAEMGQLH ETITHMVDAI RERVAYNRAI INRVPDPIIV TGPRRNIRAL NSAACALLGH
AEDDLIGKPL GSYQGADVYG AEPPIDRLAR TSEAETQLDF TRQTGGETRY FHSRAATVRK
PDGTLVGYME IRQDITAVKR GELEALERSE RIAGVARDAD AIATTVADAA SQLSDRVGEA
ARGADRQLQR SSESATAMDE MAATVREVAR NASDTNRTTA EMSERARQGA DIVEKVAAAI
EGLGSHSREL RSEMEKLGTQ ASDIGNVLGV ISDIADQTNL LALNAAIEAA RAGDAGRGFA
VVADEVRKLA EKTMNATREV EAAIGGIQQS ARRSAEATDV AVRGVTDSQA LANEAGGMLQ
EIVHAVQQAS DQVNSIATAA EQQAATGDEL NRIIAEVNEI SGSTAMRMSE AETAIAELSA
QAAALRRLMD SMT