| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1059 |
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| Symbol | |
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| ID | 7172960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1298323 |
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| End bp | 1299933 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539570 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002435481 |
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| Protein GI | 218886160 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2461] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTCG CCCCGTCCAC GTCCATACAC GATCTTGTCT CGGAGCGCCC CTACCTCATC
GACGTGCTGG CCGACTTTGC GCCCGCCTTC GCCAAGCTGA AGAACCCGCT GCTGCGCAAC
ACGCTGGGCC GGGTGGCCAC CTTGCAGCAG GCGGCGGACA TAGCCGGGCT GGAGGTCAAC
GGCCTGATGC TGCACATTGC GCGCGGCGTG CTGGACCATT CCTCCGAGGC CGTGACCATC
GTGCCCAAGG GCGCGCCCGG CACGGGCGCA AAGCCCGGCC CCAAACCCGC TGCCGAAACC
GGGGCATCGC CCTGCGCCAC CACCTGCGAC ACGCCGTGCG ATGCCGGGCA GGCGCCAGCG
TCCGGCTCGC CCCTGTCCGA TGCCGCGCGC ATGGACACCC TGAAGGAACT CATCCGCGAA
CTGCACGCCG GGGCGGACCC GGCAACGCTG AAGGCGCGCT TTGCCGCCGC CGTGGGCGAC
ATTTCCGGCG GGGACATTGC CCGGCTGGAA CAGGCCATGG TGGCCGAAGG CCTGCCGGAG
GCCGAGATAA AGCGCCTGTG CTCGCTGCAC GTGGACCTGT TCAAGGGCGC GTTGGACGAG
GCCCCGGCCG TTTCCGCGCC CGCCGGGCAC CCGGTGCGCA CCTACATGGA CGAAAACGCC
AAGGCCATGG AAGTGGCCGA CGAAATCATC TCGCAGGTGG ACCGCATGCA CCGCACCCCC
GGCGACCGCA CCTCGCCCAT CGACGAGATG GCCTGGTCGT TCAGCAGCCG CTACGTAAAG
GAACTGCTGG AAGACCTGGC CCACATAGAG GTGCACTACA CCCGCAAGGA AAACCAGCTG
TTCCCCCTGC TGGAGGAAAA CGGCATAGAG GCCCCGCCCA AGGTCATGTG GGAAGTGCAC
GACGACATCC GCGGACTGTT CAAGGCCGCC CGTGCGGCCA TGGAAAACCT GGCCGCCACG
GCAGCCGCGC TGGCCGCGCG CGACGCGGCG GAAGCCGTGA AGGACATGGT GTACAAGGAA
GAGAAGGTGC TCTTCCCCAT GGCCCTGGAA TCGCTGACGG AAGCCCAGTG GGCGCGGGTG
CGCCACGGAG AGGACGAAAT CGGCTACGCC TGGGTGACGC CCGGCGACGA ATGGAGGCCG
CAGGCGCCCG ACCTGGCGGG CGTGGCGGAC ACGGCAGGCC GGGCGCGCGC CGGCGGTGCC
GCGCAACTGG TGCAACTGGA TACCGGCGCG CTGGCGCCCA ACGTGCTCAA CCAGATGCTG
CGCAGCCTGC CGGTGGACCT CAGCTTCGTG GATGCCAACG ACCGGGTGGC CTACTATTCC
GACGTGCCGC ACCGCATCTT TCCGCGCAGC GCGGCGGTTA TCGGGCGCAA CGTGCGCAAC
TGCCACCCGC CGAAATCCGT GCACATGGTC GAGGACATCC TGGCCAAATT CAAGGCAGGC
GAACGGGATA CGGCGGAATT CTGGATCGAG CTTGGCGGAC GCTTCCTGCA CATCCGCTAC
TTTGCGGTGC GCGATACCGA CGGCACCTAC CTCGGCTGCC TGGAAGTGTC GCAGGACGTT
ACGGACATCC GCGCCCTGAC CGGCCAGCGC CGCCTGCTGG AATGGAGCTG A
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| Protein sequence | MHLAPSTSIH DLVSERPYLI DVLADFAPAF AKLKNPLLRN TLGRVATLQQ AADIAGLEVN
GLMLHIARGV LDHSSEAVTI VPKGAPGTGA KPGPKPAAET GASPCATTCD TPCDAGQAPA
SGSPLSDAAR MDTLKELIRE LHAGADPATL KARFAAAVGD ISGGDIARLE QAMVAEGLPE
AEIKRLCSLH VDLFKGALDE APAVSAPAGH PVRTYMDENA KAMEVADEII SQVDRMHRTP
GDRTSPIDEM AWSFSSRYVK ELLEDLAHIE VHYTRKENQL FPLLEENGIE APPKVMWEVH
DDIRGLFKAA RAAMENLAAT AAALAARDAA EAVKDMVYKE EKVLFPMALE SLTEAQWARV
RHGEDEIGYA WVTPGDEWRP QAPDLAGVAD TAGRARAGGA AQLVQLDTGA LAPNVLNQML
RSLPVDLSFV DANDRVAYYS DVPHRIFPRS AAVIGRNVRN CHPPKSVHMV EDILAKFKAG
ERDTAEFWIE LGGRFLHIRY FAVRDTDGTY LGCLEVSQDV TDIRALTGQR RLLEWS
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